Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKRYSFLFSSLLAVGLLQGCGDDSSSDQPKDDSNTTPPNLIVDNDPTSCSKLAQDGSSVVVGSNQNGDPAAPEGASGYRLGNTVKYADKYMVVANTPLAVKAGCDVLKAGGSAVDAAVAVQAVLGLVEPQSSTIAGSGFMMYYDAKTKQVTAYDGRETAPAAANEFYLIRQNIYDPNSPPPVPNARRSGRSIGVPGVMRLLEQAQKEHGKLEWKQLFGEAIGLADNGFRIPGRLADAIASNASNLALDADAMRIYFHSDGSPRKVGETMTNKEYADTLKAIVSEGANALHNGRIAQAIVSEAGRTEGDDPAKTPITPSLMTLQDLSNYQVKKRDPICTTYRDRYYVCTMPPPSSGGIAVAQTLGILENFDMSLYPPKNPENEGGVLDVMGVHLVSEAERLAYADRDKYVADTDFVRLLAQGIPSFIDKNYLKQRAALINPNQSMGVAP---AGNFNT-----AAG-V-DTTVEHGTTQFTIVDAYGNVVSMTSTVESSMGSFHMVD--GFLLSNQLTDFSANPYDSTGAPVANRVEGGKRPRSTMAPTLVFKGTTPDEFYMATGSPGGGTIIQYVVKTLVGALDWNLNAQQATSLVNFGATNSKNTNIDSSNVQLSLVDLIEGLKAKGHGISNT-AQTSGISTIMKVNINNQSKYAGGVDPRREGIVLGNGAL
4Y23 Chain:A ((35-579))----------------------------------------------------------------------------------DKVAVGKDGMVATAHPLASKIGAEVLKKGGNAIDAAIAIQYALNVTEPMMSGIGGGGFMMVYDGETKETSIINSRERAPEGAKPDMFLDEDG----KVIPFSERSRHGNAVGVPGTLKGLEAAHKKWGTKKMEDLISPSIKLTEEGFPIDSVLADAIKDHQDKLSK-TAA-KDIFLPDGEPLKEGDILVQKDMAKTFKLIRKEGSKAFYDGEIGRAIADVVQDFG-----------GSMTPDDLSRYEVTTDKPIWGEYHG-YDIASMPPPSSGGVFMLQMLKLIDDFHLSQYDPKSFEK---------YHLLAETMHLSYADRAAYAGDPEFVDVPLRGL---LDPDYIKERQKLISLDSMNRDVKEGDPWKYEEGEPNYEIVPQPEDKTIGEATHFTVTDQWGNVVSYTTTIEQLFGTGILVPGYGLFLNNELTDFDAIPGG------ANEVQPNKRPLSSMTPTIVFKDEKP---VLTVGSPGGTTIIASVFQTILNYFEYGMSLQDAIEEPRIYTNSLTSYRYE---SGM-PEDVRRKLNDFGHKFGSNPVDIGNVQSIFID--RENKTFMGVADSSRNGTAVGVN--


General information:
TITO was launched using:
RESULT:

Template: 4Y23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3473 -111080 -31.98 -208.80
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -31.98
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_4Y23.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Y23-query.scw
PDB file : Tito_Scwrl_4Y23.pdb: