Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVRHSFPKNIFRAYDIRGKLS-YLTTDVVRSIAYGLAQQYKQAEQTQLIIGYDARLTSPAYAHLIEEILVEQGLNVTNIGCCSTPMMYYIAREFG-GNGIMVTASHNPKSDNGIKWILRGEPPSPEMIQQVGEFAQT--YVPTHTISLLELSTPQFNSKFCKKYQQAIFNDIQLKRPLKVVLDGLHGSAGHCSKLVLEKMGCEVIALRTTPNGEFPDHAPDPSHAAHLKELRKTIIEQGADIGIALDGDGDRVVLLDEKANILTADRLLSLFAQMCLEQQPDKEIVFDVKCSLMVQRTVERLGGKPKMIRTGSSFLRAYLSQSNGNAIFGGEYAGHYVFNDGRGFGYDDGLYAALRVMEYFTKSSATTISDLFSNYPERCCTEDTYIGTHQSDP-K-HVLQDIEILSHRLGARISKIDGVRLDFDDGFGIIRASNTGEYFTVRFDADNPLRLKEIQQKFIDMLQERYPQIAQELSEA
4MRQ Chain:A ((1-452))------LPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVAGETLANEQIQALRERIEKNDLA-------SGVGSVE-QVDILPRYFKQIRDDIAMAKPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKE-T-GALLAGEMSGHVFFKE-RWFGFDDGIYSAARLLEILSQD-QRDSEHVFSAFPSDISTPEINI--TVTEDSKFAIIEALQRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAVDSSLP------


General information:
TITO was launched using:
RESULT:

Template: 4MRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2830 -2532 -0.89 -5.68
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -0.89
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_4MRQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MRQ-query.scw
PDB file : Tito_Scwrl_4MRQ.pdb: