Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSSASQLNNKQEEAMKYTQGPLLVLAGAGSGKTSVITRKIAYLVQHCRIPAHRITAMTFTNKAAREMKERVTKLLSREEAKGLSVSTFHTFGLNLLRLELKNLPLKANFSILDADDCKRILMDLMHRNNLSGAESKELIAKAMKKISDWKNDLILPEQAHSTCETPEDVQFAHLYQLYERNLRAYNAVDFDDLIVMPTRLLQENAEVRDKWQNRVRYLLVDEYQDTNTAQYILVKLLVGVMGQFTAVGDDDQSIYAWRGAKPENMALLKQDFPNLHIIKLEQNYRSTSRILKAANCVIQNNPHIFDKKLWSDKGHGEVIRIITCRNDDDEAERVVKDLLTHKLMNGKNWKDYAVLYRGNFQARVLETQLRQMQIPYKLSGGTSFFARAEIKDVMSYLRLIINPEDDSAFLRIINMPKRAIGPVTLEKLGLFAQENNLSLLGASSDQRLSMVLPKKAETQLHEFADFISTFTRELLEDDEPVPKVRQMMNEAGYIDYIREQ-SATPAQEKSKLDNIENLFSSIQNLINRAEDVDEKNIESVIRKLVLLDMLEQQQEEEDTDKVNLLTLHAAKGLEFPYVYIMGLEEELLPHKNSIAAETIEEERRLMYVGITRARQGLTLTLAEQRKNGGQMKQMTPSRFLDELPQDELEWLGRKKKIAANVDPKEQAQQYLANLKALLKR
1UAA Chain:A ((2-640))-----RLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKELTEGLIEDDKV--L-LQQLISTISNWKNDLKTPSQAAASAIGERDRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQANEEVRKRWQNKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQNYRSSGRILKAANILIANNPHVFEKRLFSELGYGAELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRL--AEREPIAAVRDLIHGMDYESWLYETSPSPKA-AEMRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMER---EEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIW------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1UAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3315 -195209 -58.89 -307.42
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -58.89
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_1UAA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UAA-query.scw
PDB file : Tito_Scwrl_1UAA.pdb: