Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRALVISTVVGAAVVLSGCQTTGNNLGGVEYDKATLGTLIGAAAGYGISKSNANSSRQNNRAAAIGAVLGAAGGLYLDQKEKKLREQMAGTGVEVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYATLDKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQARAQSVKNYLAGKGVPSSRIDAQGYGSSNPIADNSTASGREQNRRVEISIYAKQ
2N48 Chain:A ((3-141))----------------------------------------------------------------------------MDVQEAKLRDKMRGTGVSVTRSGDN-IILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL-


General information:
TITO was launched using:
RESULT:

Template: 2N48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 566 -30398 -53.71 -218.69
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -53.71
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.620

(partial model without unconserved sides chains):
PDB file : Tito_2N48.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2N48-query.scw
PDB file : Tito_Scwrl_2N48.pdb: