Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKDTIIALHAEHQGRWKNREEIAERMIALIGQLYREKNIVVSVYGRSLINRSVIQILKTHRRTRVVDVELSVVNTFPILEALAKVENIGSAEVDIGKLAVEYKEKGGDVDAFVAQAVESIKGSATSEQPKDVVLYGFGRIGRILARLIISQSGLGRGLSLKAIVVRKSSDGDLAKRASLLRRDSIHGTFAGTISVDEENEAIIANGNFIKVIYASSPSEVDYTQYGIENALLIDNTGKWRDAEGLSQHLKCPGVARVVLTAPSKGEMKNVVFGVNNSDILDEDKIISAASCTTNAITPILKVLDDKYKVLNGHVETVHSFTNDQNLIDNYHKADRRGRAATLNMVITETGAAKAVAKALPALKGKLTGNSVRVPTPNVSLAILNLTLDKEVDREEVNEYIRQISINSNLQGQIGYTNSTEVVSSDFIGSRTAGVYDAQATITSGNRLTAYV-WYDNEVGYSCQVLRIAEQMCGVSYKKIPAETNA
1HDG Chain:Q ((3-329))------------------------------------------------------------------------------------------------------------------------------------VAINGFGRIGRLVYRIIYER----KNPDIEVVAINDLTD--TKTLAHLLKYDSVHKKFPGKVEYTEN--SLIVDGKEIKVFAEPDPSKLPWKDLGVD--FVIESTGVFRNREKAELHLQA-GAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAPIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPHKDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDGSITDLTVLVEKETTVEEVNAVMKE-ATEGRLKGIIGY-NDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYGYSNRVVDTLELL--------------


General information:
TITO was launched using:
RESULT:

Template: 1HDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain Q - contact count / total energy / energy per contact / energy per residue : 1945 -175654 -90.31 -538.81
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain Q : 0.73

3D Compatibility (PKB) : -90.31
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_1HDG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HDG-query.scw
PDB file : Tito_Scwrl_1HDG.pdb: