Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKPLLLVFHPDLSQSKVNRALVATLKDQDKIDIVDIQKLYNGSLDIMNDGAIEAQRLISASHIILQFPIYWYSVPPIFKAWMDAVLTRMFYLFYEQEGQHIEGKPLYLHITVGNLSSAYQKLGQNGFTLDELMAPLKATARRCGLIWHPPHVIFNANQLNENDITEQTSLSLKQFEQWGIFNNNSFILVLSQKKRTSEKSEVRTML
3L9W Chain:A ((240-407))----LIIYAHPYPHHSHANKRM---LEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWA--YGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGF--DVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEW----------------------------


General information:
TITO was launched using:
RESULT:

Template: 3L9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 758 -131113 -172.97 -780.43
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -172.97
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_3L9W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L9W-query.scw
PDB file : Tito_Scwrl_3L9W.pdb: