Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNFARQHFRKHQAKSAAEQAAEFGSMKNATAYELQLMQLNNDRARLKQIQSTENKIKLKAELLPTYAPYIDGILEAQSGVQDEILTEIMIWNIDTSNFSRALQIAEYVLVHNLALPDRFERTPACVITEEISAAFLKQLKTNVEIDIDVLKQLESLMTNPDLPEKTLDMPDQVKAKMYLALGKAEIRFISDKDKPDLVHTKAAADYLQKAVELDDKCGGRGDLNMVQKLLDKFAPATEANKGDAAASS
2KCV Chain:A ((42-93))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TYYHLGKLYERLDR---------TDDAIDTYAQGIEVAREEGTQKDLSELQDAKLKAEGLE-----------


General information:
TITO was launched using:
RESULT:

Template: 2KCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 170 -7335 -43.14 -141.05
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -43.14
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.758

(partial model without unconserved sides chains):
PDB file : Tito_2KCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KCV-query.scw
PDB file : Tito_Scwrl_2KCV.pdb: