Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNYGITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNPATPLHYLDHVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDA----SGRDIRLEVDGGVGPANIREIAEAGADMFVAGSAIFGQPDYKVMIDQMRAELAKVGSVDA
5UMF Chain:B ((11-232))---AYRIAPSILSADFARLGEEVANVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY-ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPVYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDRYEGKSGRRIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIAAMRAELEK------


General information:
TITO was launched using:
RESULT:

Template: 5UMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1226 -166819 -136.07 -765.22
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.89

3D Compatibility (PKB) : -136.07
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.749

(partial model without unconserved sides chains):
PDB file : Tito_5UMF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UMF-query.scw
PDB file : Tito_Scwrl_5UMF.pdb: