Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMFTKLALVSSLAISANAMAMQSMDDAALSAATGQDGINIGIALGTSGISIDKLYLHDNDGLATTTGITGATGTAGALAISDVTLKQTGTGNLLDLAIDTNGASST---NGAFLNVAATVGAVDIHVGSIGVGTSGTVNETTALRGITETAPTEIISGLDLS--LGQITANVQLGSTPQGAMIK--VDSALKGGLTISNLGINDAAGGGSILLDKVMVRGAGNATGDLDVKADISVTGNGLQVKSTSAQDMNVYVGGVHLGTNTKASDGTWGTGAVKAASIGDLEIQGLNVANTTITISGH
1Q5P Chain:A ((20-210))----------------------------------------------------------------------GLTGSGVKVAVLDTGISTHPDLNIRGGASFVPGEPSTQDGNGHGTHVAGTIAALDNSIGVLGVAPSAELYAVKVLGASGSGAISSIAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVNSATSRGVLVVAASGNEGAGSIDYPARYANAMAVG-ATDQNNNRASFSQYGAGLDIVAPGVNVQSTYPGSTYASLN--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Q5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1093 -14072 -12.87 -76.48
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -12.87
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.302

(partial model without unconserved sides chains):
PDB file : Tito_1Q5P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q5P-query.scw
PDB file : Tito_Scwrl_1Q5P.pdb: