Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMHYSRLKLTVQTPLKLKDLTYKFVVTNNSTKKKTEFEGRFDDQGLTGWTEIYNLNTSLIYEVYLRGEILQKIAVKAYPNKKTHSVFTIKVTSEITKNVKENIKEIYLNDGEVAWYLIKKTETMLDWSKRVFKKPLNVSDWDTLKANNPHIPNMAPIRLLSPGMVVVLSNSTTAKELPRYKKEAQEAQKRLEEMKKDKDFDAEFFAQNYEFFYDALNDSRTEITNENIFTNNDHPLIYQLDGSENESGVAWGSIGKGGIDATLAFHEGTVTRMNQIHGELALKMAEERAKGSGLANPKNFKAFRQKYKDLYKALDHEYSKGVFKWDRSIKTNNMRRIINQSSLARGVTYKGGMKEYVEKMGELGKMSKVIKGGGYLFLALDIYNASDAIANAKPEEKAKTAVVETSKIAGGLAGGAVGAFIVLTVATGGTSLIVLGVAAGASALVGWAGGEVGGYLGKEGYELISK
1VPV Chain:A ((155-187))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEVLKKLDERMKNKDFKAIFYVSNFDYL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VPV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 9 -2388 -265.33 -85.29
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -265.33
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.711

(partial model without unconserved sides chains):
PDB file : Tito_1VPV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VPV-query.scw
PDB file : Tito_Scwrl_1VPV.pdb: