Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFRIFTIFLLILSTNIEAK-----EKLITGEKI---ASSY---KLLQSMTIPAIYENGMVLTKYANLYKMDNQCVIVSKLDNESNFGGYEDIIYFKNGIMLRSSKQSFFSIFLDDEAKIKSKEIKYGDFLNGKEVQKGLKEDFIQYRKKFNKYTLSKCS
3DIN Chain:C ((224-344))----LITIFGIILVQQAERRITIQYARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNNET-----LKNLFRAGGFLYLLIYG---LLVFFFTYFYSVVIFDPREISENIRKYGGYIPG---------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 196 -10274 -52.42 -93.40
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain C : 0.66

3D Compatibility (PKB) : -52.42
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.022

(partial model without unconserved sides chains):
PDB file : Tito_3DIN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DIN-query.scw
PDB file : Tito_Scwrl_3DIN.pdb: