Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYLRPVMNSSNSHFNEVDPTLINETIPLFEKVPFNPIYPSKFKFIDLFAGIGGFRLAFQNLGGRCVFSSEIDLAAQKTYTANFGDTPYGDITLESTKDAIPDNFDILCGGFPCQAFSIAGKRSGFEDTRGTLFFDVADIIKRKQPKAFFLENVKGLVSHDKGKTLRTILQVLREDLGYYVPEPKIINAKDFGVPQNRERIFIVGFHKDTGVHDFEYPTPTGKKVCFADVKEENVVPTKYYL-------SNQYLQTLERHKAHHESKGNG-FGYAIIPDNSIANAIVVGGMGRERNLVIDHRITDYTPTTRIKGEVNRQGIRKMTPREWARLQGFPDNFKIIVSDAAAYKQFGNSVAVPAIQATANLILEKLKMK
2I9K Chain:A ((9-324))--------------------------------------LTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEK-TIP-DHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNAASHDNGNTLEVVKNTMN-ELDYSFHA-KVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITL-SAYGGG-----------IFAKTGGYL---VNGKTRKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAYNIGSSLNF-


General information:
TITO was launched using:
RESULT:

Template: 2I9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1803 -116429 -64.57 -378.01
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -64.57
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.436

(partial model without unconserved sides chains):
PDB file : Tito_2I9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2I9K-query.scw
PDB file : Tito_Scwrl_2I9K.pdb: