Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------MEEMSMRYV---SKFLLGIYLFFLLWLILFKLSFNLPQFLTYSYSNVNLVPFSTFSFENTTVLRETTYNLIVFFPFGVLLNV-----NFKRLSFSKKLGIIFLVSFLAE----------LIQFLFGIGVADITDLITNTTGGLIGLWA---YQLLNKHLSTNKLDRLAIILGYI-----------LFLFLIVAFLFLTRTVRLQ-----
5EIK Chain:A ((10-243))IDHDTLIDAGGYVQKLKLYPYFDAAHYVLTCLSVRHDLGPDAISFSRKHPFSCWLSCMLMSFAGSFLSCFLLGEPIISPLKQ---HADILLGSIVWYLVFYSPFDVVFRLATWFPVKLGLSVLKEVQRTHKIAAGVKHAVRIYPESYLVQILVGVAKGAGSGVVKIVEQLARGTWHPTNHEILRPSFTTKACVIASIVFTLERHSMYVTAPHDLVYLCVVGFFIYFKLASLCLSVHD


General information:
TITO was launched using:
RESULT:

Template: 5EIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 586 -82702 -141.13 -489.36
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -141.13
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.168

(partial model without unconserved sides chains):
PDB file : Tito_5EIK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EIK-query.scw
PDB file : Tito_Scwrl_5EIK.pdb: