Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKSRLEAFTDGVVAIVLRVLVLEIKIPN---------TSSFHSLWVIRNTLLAYTISFIFVAVIWVNHHRIFQMAERINYRVVWSNIFLLFWLTLCPSVTSWVGR---NPEAFWPEMAYVLVYTMWSFSFGILMRQIMKANKPDSHVVRVLSKDRR------------SLIS--MMINLCLIAGVFFVPLIGLFGRFFVSGIWIFSYKKADAYYQRLFPGK
5VRE Chain:A ((11-197))---GRIEAFSDGVFAIAITLLVLEIKVPQHKIVETVGLVSSLLSLW---PSYLAFLTSFASILVMWVNHHRIFSLVARTDHAFFYWNGLLLMLVTFVPFPTALLAEYLIHPQARVAASVYAGIFLAIAIVFNRLWKHAAT----DRHEVDAITKQYRFGPGLYLVAFALSFISVWLSVGVCFVLAIYF----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5VRE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 443 -45470 -102.64 -299.14
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -102.64
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.310

(partial model without unconserved sides chains):
PDB file : Tito_5VRE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5VRE-query.scw
PDB file : Tito_Scwrl_5VRE.pdb: