Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKMSEKYQVTKKDLRKANYRWLMSVCTFNYQTQQGAS-VTYALSPILRKLYKDDDEYI---EALNNHFQYYN--TQPWLAAIILGACVAMEEKQGLEAKDAINDFKVGTMGPIAGIGDSLLMTMIPTIMGSIAAYMALENNPVGIFLWFILIMVIFFFRMRGFEFGYKQGMKIVTEYGEKINYLTEAASVLGLTVVGSLIASVISVSTPLKFTFGEVSMKIQPMLDKILPTLIPVIITAAAYYLLSKKKISMTILILLVIVFAMVMAAFGILA
5TJA Chain:A ((1-212))GSGLSNQLAVTFREENTIAFRHLF---LLGYSDGADDTFAAYTREQLYQAIFHAVDQYLALPDVSLGRYAYVRGGGDPWTNGSGLALCQRYYHRGHVDPANDTFDIDPMVVTDCIQV-----------------------DPPNLTLKFHKLVNVTIHFRLKTIN-----------------------------------LQSLINNEIPDCYTF-SVLITFD---NKAHSGRIPISLETQAHIQECKHPSVFQ---------------HG---


General information:
TITO was launched using:
RESULT:

Template: 5TJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 769 -39351 -51.17 -212.71
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -51.17
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.057

(partial model without unconserved sides chains):
PDB file : Tito_5TJA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TJA-query.scw
PDB file : Tito_Scwrl_5TJA.pdb: