Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISKRKHVIIFPILCKKIQGGGSTMIEEYIEKNILRQLFLCGQFYV-NKEVNLEKLSNLLHVCKTTLLNDINNIKKEFEEQIAYTHREKDRYTLYFSEHIPRCKIMQQLSQNSLFLKTCLLYLEEDEPDYLQLTECEFISVSKAYSLKKQVLAYFNDCGIEIDR--YSPRFTEMERRLLLLN-VSYRLGGFNSWELPESFFERADRFIESVTE-NSGRFYDKENKEILSIGFAISFLRQQVCAVTIDSKF-IEEIKKRPIYNYVES---AWENTDFQTYYKKEEFAFILTLFNLCNYGF-HSYQLIAEDFQQLHQVFIDNTPEIKELVATFESHFNQELFGNQPFERALIHLMRSAWDNYQLFMP----EKFYLLNEEQTNLYKEVQTIFSSWSSQLPYDLRLNPNCMRAFVIELSGILR-LTKEHLTIYIVTNSDVHYL-IYREALEA-VTTFDFQVAPTIYSSISDIKKYAQQSSNRVLCERTLYTPDAVQYENIIPISINTIDRAIISAVQNK
4R6I Chain:B ((3-473))----------------------AMLTPISIEKEHIRLINLLHFINEQNRWFTIKELSDYLQVADKTVRKYLKLLEDEIPPSWNLLVQKGKGIYLKKPLNESLSFVESKILRKSLNLQICEELVFKK-NSMQSLAQKLHLQVGALYPIINQINYDIQSSHLNIKKKPLEISGREQDVRVFMLRLYCNI-PNDYWPFPYINK-QNITDLINKMEKILNVQ-MYTYSKHKLCVLFAITISRLLSGNTIDNVSGLILVNKNDDHYKTVASITSELQNS-FGVTLHETEISFLALALLLSLGNSIT---NKT--LTS---YKKTIMPLAKEITKGIEHKLQLGINYDESFLTYVVLIIKKALDKNFIQYYNYNIKFIRHIKQRHPNTFNTIQECISNLNYTVYS--HFDCYEISLLTMHFETQRMLFKNNPKKIYVYTSQGCIHREYISALLEKRYNG-LIKIVRNTI----------DMEIDIIISN------------------EFPTERDFHE-----


General information:
TITO was launched using:
RESULT:

Template: 4R6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1811 -5023 -2.77 -11.74
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : -2.77
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_4R6I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R6I-query.scw
PDB file : Tito_Scwrl_4R6I.pdb: