Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYANGGDEMEKPIEKALDECLFFSVKKLDRMLNKLADEAFRRTGLAPTYGFILLILKEKDGIPQKDIAQMLYSAPSTIARFVEKLEYKGYVKTVSEGRLSLVYLTEQGRQFAKEVDGSWEELHQSYKAVLGNEASKELAQTMNDATDKLQKK
2PEX Chain:B ((13-152))------------TLLQLDNQLSFALYSANLAMHKLYRGLLKALDLTYPQYLVMLVLWETDERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTR----VIIALTETGRALRSKAGAVPEQVF--CASACSLDELRQLKQELEKLRSSLGA-


General information:
TITO was launched using:
RESULT:

Template: 2PEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 361 -72820 -201.72 -547.52
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -201.72
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_2PEX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PEX-query.scw
PDB file : Tito_Scwrl_2PEX.pdb: