Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIVKRPKRRISMQFGRFRLGMRTIKSALAVFLCILFFHLTQRGIPMIAALSAVFSLRQDLTTTVSFGKSRIIGNTLGGTLAIIYFFVKSYFHNDFLVELILLPILVII----VIVVSDGINNNSGIISAIATLLLIALSIPQGESALYAIQRVLDTFIGTFIAIGINFFLRPPETEKKEELSEDLVELQKKERLLRTNLQEIEAKIQKQKKNSED
1UB2 Chain:A ((606-706))--------------------------------------------------------------TVLIGGLRVLGTNHGGTKHVVFTDREGVLTNDFFVNLTDMNYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFVA----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1UB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 395 -35551 -90.00 -366.51
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -90.00
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.227

(partial model without unconserved sides chains):
PDB file : Tito_1UB2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UB2-query.scw
PDB file : Tito_Scwrl_1UB2.pdb: