Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKMQAKEVVDQVTMKRALTRITYEIIERNHSIQDIVLVGIKTRGIYIASRIAERLKQLEDIDIPVGELDITLYRDDKKENPEEPELHSSDIPVSLEGKEVILIDDVLYTGRTIRAAMDAVMDFGRPRKISLAVLVDRGHRELPIRADYVGKNIPTSRAEEILVEMQELDGQDRIMILKEED
2IGB Chain:B ((1-176))--MQKAVVMDEQAIRRALTRIAHEIIERNKGIDGCVLVGIKTRGIYLARRLAERIEQIEGASVPVGELDITLYRD----DDHEPLVKGTNVPFPVTERNVILVDDVLFTGRTVRAAMDAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTSRSELIVVELSEVDGIDQVSI-----


General information:
TITO was launched using:
RESULT:

Template: 2IGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 874 -127395 -145.76 -749.38
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.91

3D Compatibility (PKB) : -145.76
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.628

(partial model without unconserved sides chains):
PDB file : Tito_2IGB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IGB-query.scw
PDB file : Tito_Scwrl_2IGB.pdb: