Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGYDKHQARTSGWRVPENNLIFVSLLGGGLGGLISRKVFHHKTRKKKFTIGFAAGVLVDLILIYFFH
5BR6 Chain:D ((12-31))--------------------------GGWTGMIDGWYGYHHENSQG---------------------


General information:
TITO was launched using:
RESULT:

Template: 5BR6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 12 -402 -33.46 -20.08
target 2D structure prediction score : 0.25
Monomeric hydrophicity matching model chain D : 0.47

3D Compatibility (PKB) : -33.46
2D Compatibility (Sec. Struct. Predict.) : 0.25
1D Compatibility (Hydrophobicity) : 0.47
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_5BR6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BR6-query.scw
PDB file : Tito_Scwrl_5BR6.pdb: