Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFWHFYKYRTKILLRNKSMLFWTLAFPILLGLMFMAAFGEIDQGGNLETINTGIVIKADQTALSENFTTVLEQVEVNDKPLFEVQELSEVEANEKLNADDLAGFYLIDGSSVSLHVGQAGMSQTLMKNVMDQFLQRIGIISSKVAEVENVDLAPIMTVFEQEVSFQEVHAGRNMSFKSFYFFTLIGMAILYGTMWGVRNVQDQQANQSSNGIRLSLIPRKQSLVSIANLAASFTIVLTEIYIMLAVFRFIYQVDF-GERWQWLMIVTALGSLCAILLGTLVGNLIPKMNLVQKDSILISVTIAMSFF-AGMMGSEQ-VKYWIDLHIPIVGQLNLVNLISESLYKLYFYTD-LA-----------------------SFYTNLLWLIGFIFLFALGNAWMERGVRYDAL
5DO7 Chain:C ((446-647))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAVSDQESQDGLYQKWQMMLAYALHVLPFSVVATMIFSSVCYWTLGLHPEVARFGYFSAALLAPHLIGEFLTLVLLGI-VQ-NPNIVNSVVALLSIAGVLVGSGFLRNIQEMPIPFKI----ISYFTFQKYCSEILVVNEFYGLNFTCGSMCAFTQGIQFIEKTCPGATSRFTMNFLILYSFIPALVILGIVVFKIRDH---


General information:
TITO was launched using:
RESULT:

Template: 5DO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 518 -69835 -134.82 -420.69
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.56

3D Compatibility (PKB) : -134.82
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.182

(partial model without unconserved sides chains):
PDB file : Tito_5DO7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DO7-query.scw
PDB file : Tito_Scwrl_5DO7.pdb: