Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKMKKYKIRKSGNSDVTTIPPEVKEFMGVQTGDAISYVFQSDGSVRMIKAQEEPDIDSLVDSIMNQYEDALKDLVDL
1MVF Chain:E ((4-47))------SSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLV-DGKLIIEPV---------------------------


General information:
TITO was launched using:
RESULT:

Template: 1MVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 75 -10186 -135.81 -231.50
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain E : 0.64

3D Compatibility (PKB) : -135.81
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.748

(partial model without unconserved sides chains):
PDB file : Tito_1MVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MVF-query.scw
PDB file : Tito_Scwrl_1MVF.pdb: