Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKVIIDCDPGIDDTLALSLAVKSPDIEVVAITVVCGNVPADIGTQNVLKCLERCDRLDIPVYQGMEKPLKQPFISAQDTHGMDGLGETNFPMILRKQAEPLHAVDFLADYF--KEKTNTSVIALGPLTNIASALKVNPNIGKHMERFVSMGGTYKSHGNCSPVAEYNYWCDPEAASYVFENLKQTIEMVGLDVTREIVLTPTILEYCCQMNPEEGEYLKAITRFYFDFHWKQERILGCVINDPLAVAYFIEEAICEGFKSFTAVETQG-ISRGQTLVD-RYEFWQKPANSKIMTKVDTRLFFRKFLTVLLNAQEETIMKDLERLKMG
1EZR Chain:A ((3-309))-RKIILDCDPGIDDAVAIFLAHGNPEIELLAITTVVGNQSLEKVTQNARLVADVAGIVGVPVAAGCTKPLVRGVRNASHIHGETGMGNVSYPPEFKTKLDGRHAVQLIIDLIMSHEPKTITLVPTGGLTNIAMAVRLEPRIVDRVKEVVLMGGGYHT-GNASPVAEFNVFIDPEAAHIVF-NESWNVTMVGLDLTHLALATPAVQKRVREVGTKPAAFMLQILDFYTKVYEKEHDTYGKV-HDPCAVAYVIDPTVMTTERVPVDIELNGALTTGMTVADFRYP---RPKNCR--TQVAVKLDFDKFWCLVIDALER------------


General information:
TITO was launched using:
RESULT:

Template: 1EZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1842 -105744 -57.41 -348.99
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -57.41
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_1EZR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EZR-query.scw
PDB file : Tito_Scwrl_1EZR.pdb: