Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELNRMIDHTILKADASKEAVMQIIEEAKKYHFYSVCINPAWVALAKEQLQGEPVAVCTVIGFPLGANTPETKAFETTDAINNGADEVDMVINIGALKSKDDQQVQKDIEAVVEAAKDRALVKVIIETSLLDREEIIRACEIAKAAGADFVKTSTGFSTGGAKVEDVRLMRETVGPEMGVKASGGIHNEEEAMAMIEAGATRIGTSAGVAIVSGSTGEGY
5DBU Chain:B ((4-213))MKLNKYIDHTILKPETTQEQVEKILAEAKEYDFASVCVNPTWVALAAESLKDSDVKVCTVIGFPLGANTPAVKAFETKDAISNGADEIDMVINIGALKTGNYDLVLEDIKAVVAASGD-KLVKVIIEACLLTDDEKVKACQLSQEAGADYVKTSTGFSTGGATVADVALMRKTVGPDMGVKASGGARSYEDAIAFIEAGASRIGASSGVAI---------


General information:
TITO was launched using:
RESULT:

Template: 5DBU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1253 -121930 -97.31 -580.62
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.90

3D Compatibility (PKB) : -97.31
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.712

(partial model without unconserved sides chains):
PDB file : Tito_5DBU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DBU-query.scw
PDB file : Tito_Scwrl_5DBU.pdb: