Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFKAVSEGEKTFTHLVVAGHTPDPISPCGACRQVMAEFCSPDMPVTLVGDNGVTKATTVRALLPYAFTEKDL
1JTK Chain:B ((2-130))---NRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSEDL


General information:
TITO was launched using:
RESULT:

Template: 1JTK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 659 -79010 -119.89 -612.48
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain B : 0.86

3D Compatibility (PKB) : -119.89
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.596

(partial model without unconserved sides chains):
PDB file : Tito_1JTK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JTK-query.scw
PDB file : Tito_Scwrl_1JTK.pdb: