Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDKQKIDEFFWNKTTPEVARDLLGMYLEHDTPEG-RLAGYIVDAEAYLGPEDEAAHSYGLRRTPRVRAMYEKPGTIYLYTMH-THRILNIITQPEGIPQGVMIRAIEPAAMIDQM----SKNRGGKTG----PDISNGPGKLVEALAIPQELYGQSIADSSLRLVFEKKKTPKK--INALPRIGIPNKGVWTEKPLRFVVSGNPYISLQRKNQIEKDWGWRKENEKEGSINIFR
3QI5 Chain:A ((10-208))--------EFFDQPAVP-LARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQTPRNRGMFMKPGTLYVYIIYGMYFCMNISSQGDGA--CVLLRALEPLEGLETMRQLRSTLRK----VLKDRELCSGPSKLCQALAINKSFDQRDLAQDEAVWLERGPLEPSEPAVVAAARVGV----EWARKPLRFYVRGSPWVSV--------------------------


General information:
TITO was launched using:
RESULT:

Template: 3QI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 930 -41615 -44.75 -233.79
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -44.75
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_3QI5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QI5-query.scw
PDB file : Tito_Scwrl_3QI5.pdb: