Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMYSIGQVSEMFGLPVSTLRYYDKEGLFPDIQRVS-GIRKFSENELEALRVIDCLKKSGLEIKDIKQFMEWSKEGSKTFEVRKELFEKQKEVVEKEIAKLERVLAMLNYKSWYYEEAIKAGNEEAVLTMIPDDLPQHVKEAYVHSH
5D8C Chain:A ((5-128))-YTTAKAAEKIGISAYTLRFYDKEGLLPNVGRDEYGNRRFTDKDLQWLSLLQCLKNTGMSLKDIKRFAECTIIGDDTIEERLSLFENQTKNVKCQIAELKRYLDLLEYKLAFYQKAKALGSVKAV--------------------


General information:
TITO was launched using:
RESULT:

Template: 5D8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 286 -633 -2.21 -5.14
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -2.21
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.685

(partial model without unconserved sides chains):
PDB file : Tito_5D8C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D8C-query.scw
PDB file : Tito_Scwrl_5D8C.pdb: