Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRYSTILISTFAALSLSLTINQTVHTEEIETAKWTETKWANVNRITFQDEFSSFNSGVAKLRKGQTATIKAKIDYSGDLAPILQSAVTFENVDPALSIGYDENTLTIQHKQAIFTFTVTLNQDLLKPALFTVKVSDGLPNDHHHLTPYSQRQTIEQDSAIDSGGDLVEEPTDKPENENKPEVPPTENPDGEQKPEIEPGEEPDTETQPEPDNESKPEITPGEK----PDVDPEE--KPDVTPEPDTDSGNQTVPETNPDTDNETENPEKPEVAPEEKPDVTPEPDTDSGNQTVPETNPDTDNETENPEKPEVDPEEKPDVTPEPDTDARDQGIPEKINKKTIQEDGKKESKKSNLAILKINEEQLNKKSRIFDSAQSAETLKSSKDTTFASPETKNKQLPKSGESQNKVILWSGIILLSIATMLSAKRFKQNRSL
1V0S Chain:A ((248-330))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTMHKDTNPKASPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVVGLHDNTNADRDYDTVNPEE----------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1V0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 76 18097 238.12 274.20
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 238.12
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_1V0S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V0S-query.scw
PDB file : Tito_Scwrl_1V0S.pdb: