Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MEKKEFHVVAETGIHARPATLLVQTASKFNSDVNLEYKGKSVNLKSIMGVMSLGVGQGSDVTITAEGADEADAMAAIVETMKKEGLSE 1PTF Chain:A ((1-87)) MEKKEFHIVAETGIHARPATLLVQTASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGSDVTITVDGADEAEGMAAIVETLQKEGLA-

General information: TITO was launched using: RESULT: Template: 1PTF.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 402 -44059 -109.60 -506.42 target 2D structure prediction score : 0.76 Monomeric hydrophicity matching model chain A : 0.99 3D Compatibility (PKB) : -109.60 2D Compatibility (Sec. Struct. Predict.) : 0.76 1D Compatibility (Hydrophobicity) : 0.99 QMean score : 0.559

(partial model without unconserved sides chains): PDB file : Tito_1PTF.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1PTF-query.scw PDB file : Tito_Scwrl_1PTF.pdb: