Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGLIGSGQMGNRVEEVAQERGDTVL-LLRTAPKEATT------LAFTELPELLIDFSHPDNLEKILSYSLSYQLPLVIGTTGYTQSQFQEIKEHAKHVPVMYSANFSFGIMVMNQLIKQAAAMLQGWQIELIEKHHSRKKDAPSGTANMLLQTIQEV-QKLQPVYNWQ--GKKREENQIGVHSIRAGSLPGEHDVLFAATDEIFTIKHESFSNRIFAAGAVEAADWLKDQSPGYYKLEDLLMDKGV
3QY9 Chain:B ((4-243))MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVKGADVAIDFSNPNLLFPLLDED--FHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL------


General information:
TITO was launched using:
RESULT:

Template: 3QY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1107 4833 4.37 21.01
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : 4.37
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_3QY9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QY9-query.scw
PDB file : Tito_Scwrl_3QY9.pdb: