Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQSKQKQSRRLLFRLFLLICIVVGLLIALYPFYVDSLNSFIDQKRIEQVQKRTAAEIE----VQRKKMEEKNQRLTDQGFNPGTDPFNEKNR---NESTTSSQLEEWLIGSINIPKIQLNISLYDRLNGRILENGAGVLQGTSFPLGGNSTHSVISAHSGLPNRRLFTELDRLENGDTFILTVLGEKLAYQVKNIQVVLPDDTSVLTISEGEDLVTLLTCTPYMINTHRLLVTGHRIPYNESVKKEEGKGNQERTMRQWFILAGTIIAVVILLVFIGRLIYQYRLSKKVLDFSFIISDSSGKPVNGSSFILKHKKKTLTRNGVPFSVQSDHHGKVKLDQLPGGTYRIVSADDPKVAVSFGIRKVKQEKIYFFEGRKLVKELQKNGFYFKINE
2W1J Chain:A ((4-198))--------------------------------------------QQIADFDKEKATLDEADIDERMKLAQAFNDSLNNV---VSGDPWSEEMKKKGRAEYARMLEIHERMGHVEIPVIDVDLPVYAGTAEEVLQQGAGHLEGTSLPIGGNSTHAVITAHTGLPTAKMFTDLTKLKVGDKFYVHNIKEVMAYQVDQVKVIEPTNFDDLLIVPGHDYVTLLTCTPYMINTHRLLVRGHRIPYVA-------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2W1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1017 18921 18.60 100.64
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 18.60
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_2W1J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W1J-query.scw
PDB file : Tito_Scwrl_2W1J.pdb: