Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------MTQEI-----------KKLPVIFLGLFFITVGLNWFLLPHD-----IASAGVGAIGHLVETAFSIQRSVTVWSINLMMLLLAAVLLGKSVFFKTVAGSLLFPVVLEIVPKVEMISSHFFSLISGSLLFSLGVYTLYTVGASNGGITIP-----PIIFHKFFRLPMP-------QGLLLTNSLIVFLNYYVFGLLETLFVLLSITVSSLFMKILIRLSPVSRKFE---------------------------------------------------
5IPX Chain:A ((32-322))HLFNHLFRYHYPSWDQILQELDTLSVATLNPDCHVPALNVEKTLYLAKTIQILVQHRQSEPYLVPAARANLAYSLQQLYKLGNDKIRGVINGMLPLVDAGCIGFERELIKGLPRVLTLQYPHTAPCTEWCLSHF---VGASGRLRSEVRDILT---THNGTCAPSFEWMASVVKKFFLVETVIYEDFQDTDFNVQLNLCFFWTAVVQMYQRCIY---EQKLVHIISTSLTLLKSTARSFFAWYDLYRPNLGSAALVKYTEHLIRALTPDCSDVELGELCSHLHHCKHALFS


General information:
TITO was launched using:
RESULT:

Template: 5IPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 499 -45824 -91.83 -245.05
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -91.83
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.284

(partial model without unconserved sides chains):
PDB file : Tito_5IPX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IPX-query.scw
PDB file : Tito_Scwrl_5IPX.pdb: