Atome 2 Filter

@TOME V2.3
(Nov 2016)

Ref. - - Doc.

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling

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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : PF01471_MMP16_: (2014-09-24 )
MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPTRPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITVWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRVKEGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV

Atome Classification :

	(13 SA)									.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210..---.....220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340...--.--...350--.......360.......370.......380........390......-.400..-.-....410.......420.......430....--...440.......450.......460.......470.....-.-.-480.......490.......500...---....510.......520.......530.......540.......550.......560.......570.......580.......590.......600.....
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGP---GIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPTRPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDG--N--FNTLAI--LRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYEN-SDGNFV-F-FKGNKYWVFKDTTLQPGYPHDLITLGSGIPP--HGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPI-T-V-WKGIPESPQGAFVHKENGFTYFYKGK---EYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRVKEGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV
33	HHSearch	72.20	41%	-100	- C1 -	4FVL		?	A:[6-368]	--------------------------------------------------------------------------------------------------------------------------RTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLH-------DGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGP---NYGGDAHFDDDETWTSS---SKGYNLFLVAAHAFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPN---------------P---------K-------HP----KTPDKCDP--SLSLDAITS--LRGETMIFKDRFFWRLHPQ-QVDAELFL-TKSFWPELPNRIDAAYEHPSHDLIF-I-FRGRKFWALNGYDILEGYPKKISEL--GLPKEVKKISAAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLI-EED-FPGIGDKVDAVYEK--NGYIYFFNGP---IQFEYSIWSNRIVRVM---PANSILWC---------------------------------------------------------------------------
10	PsiBlast_PDB	67.17	38%	-84	- C1 -	4G0D		MMP13_HUMAN	A:[9-362]	-----------------------------------------------------------------------------------------------------------------------------KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNF-----TRLHDGI--ADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGP---NYGGDAHFDDDETWT---SSSKGYNLFLVAAHAFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHP-----------------------------------KTPDKCDP--S--LSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFL-TKSFWPELPNRIDAAYEH-PSHDLI-FIFRGRKFWALNGYDILEGYPKKISELGLPKEV--KKISAAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLI-E-EDFPGIGDKVDA--VYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPA---------------------------------------------------------------------------------------
34	HHSearch	64.64	41%	-90	- C1 -	3BA0		MMP12_HUMAN	A:[1-365]	---------------------------------------------------------------------------------------------------------------------------GPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKIN-------TGMADILVVFARGAHGDDHAFDGKGGILAHAFGPGS---GIGGDAHFDEDEFWTTH---SGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQ----------R-------L------PNP----------DNSEPALCDP--NLSFDAVTT--VGNKIFFFKDRFFWLKVSE-RPKTSVNL-ISSLWPTLPSGIEAAYEIEARNQVF-L-FKDDKYWLISNLRPEPNYPKSIHSF--GFPNFVKKIDAAVFNPRFYRTYFFVDNQYWRYDERRQMMDPGYPKLITK-N-FQGIGPKIDAVFYSK-NKYYYFFQGS---NQFEYDFLLQRIT---KTLKSNSWFGC---------------------------------------------------------------------------
11	PsiBlast_PDB	63.25	38%	-84	- C1 -	1FBL		MMP1_PIG	A:[9-355]	-----------------------------------------------------------------------------------------------------------------------------RWENTHLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGP---GIGGDAHFDEDERWT---KNFRDYNLYRVAAHELGHSLGLSHSTDIGALMYPNYIY--TGDVQLSQDDIDGIQAIYGPSENPVQPSGP-----------------------------------QTPQVCDSKLT--FDAITT--LRGELMFFKDRFY--MRTNSFYPEVELNFISVFWPQVPNGLQAAYEI-ADRDEVRF-FKGNKYWAVRGQDVLYGYPKD-IHRSFGFPSTVKNIDAAVFEEDTGKTYFFVAHECWRYDEYKQSMDTGYPKMI-AEE-FPGIGNKVDAVF--QKDGFLYFFHGT---RQYQFDFKTKRI------------------------------------------------------------------------------------------
46	HHSearch	48.98	100%	-88	- C1 -	1RM8		MMP16_HUMAN	A:[1-169]	---------------------------------------------------------------------------------------------------------------------------GQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGP---GIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18	PsiBlast_PDB	37.18	51%	-78	- C1 -	2WO8		MMP12_HUMAN	A:[2-161]	---------------------------------------------------------------------------------------------------------------------------GPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKF-----SKINTGM--ADILVVFARGAHGDFHAFDGKGGILAHAFGPGS---GIGGDAHFDEDEFWT---THSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19	PsiBlast_PDB	36.67	51%	-75	- C1 -	2WO9		MMP12_HUMAN	A:[2-161]	---------------------------------------------------------------------------------------------------------------------------GPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKF-----SKINTGM--ADILVVFARGAHGDFHAFDGKGGILAHAFGPGS---GIGGDAHFDEDEFWT---THSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20	PsiBlast_PDB	36.57	51%	-74	- C1 -	2WOA		MMP12_HUMAN	A:[2-161]	---------------------------------------------------------------------------------------------------------------------------GPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKF-----SKINTGM--ADILVVFARGAHGDFHAFDGKGGILAHAFGPGS---GIGGDAHFDEDEFWT---THSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
56	HHSearch	35.27	52%	-73	- C1 -	3AYU		MMP2_HUMAN	A:[3-165]	-----------------------------------------------------------------------------------------------------------------------FFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHD-------GEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGT---GVGGDSHFDDDELWTLGKG--VGYSLFLVAAHAFGHAMGLEHSQDPGALMAPIYTY--TKNFRLSQDDIKGIQELYGAS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
54	HHSearch	34.90	49%	-81	- C1 -	1I76		MMP8_HUMAN	A:[2-163]	-----------------------------------------------------------------------------------------------------------------------LTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-------QGEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTNTS---ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57	HHSearch	33.87	51%	-68	* C1 *	4H1Q		MMP9_HUMAN	A:[3-160]	--------------------------------------------------------------------------------------------------------------------------GDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYS-------RDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGP---GIQGDAHFDDDELWSLGK--GQGYSLFLVAAHQFGHALGLDHSSVPEALMYPMYRFT--EGPPLHKDDVNGIRHLYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
53	HHSearch	33.06	46%	-72	- C1 -	1HV5		MMP11_MOUSE	A:[2-162]	-----------------------------------------------------------------------------------------------------------------------FVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVHE-------GRADIMIDFARYWHGDNLPFDGPGGILAHAFFPKT---HREGDVHFDYDETWTIGDN--QGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTF--RYPLSLSPDDRRGIQHLYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50	HHSearch	32.81	43%	-72	- C1 -	4IN9		?	A:[1-165]	-----------------------------------------------------------------------------------------------------------------------YVLQGSKWNKTTLKYYIYN----LTTTERENAIRSAFALWSDKSTLSFIQVYN------PNQADIKIKWEKGNHGDGYPFDGNTGILAHAFYPPPAGGNYAGHLHFDDDENWSIN---GSGIDLITVAAHEIGHLLGIEHSNVSSALMYPYYTGIKR---QLDNDDCLAVWDLYGYP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------