Atome 2 Filter

@TOME V2.3
(Nov 2016)

Ref. - - Doc.

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling

Templates Information:

Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : PF01471_MMP24_: (2014-09-24 )
MPRSRGGRAAPGPPPPPPPPGQAPRWSRWRVPGRLLLLLLPALCCLPGAARAAAAAAGAGNRAAVAVAVARADEAEAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCGVPDHPHLSRRRRNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFKLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPSTPGTKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFFKGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTINDVPGSVNAVAVVIPCILSLCILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV

Atome Classification :

	(13 SA)									.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250-.........260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380--.--......390.......400.......410.......420.......430...-....440.-.......450.......460...-....470.--.--.....480.......490.......500.......510..-.-.-...520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640...
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		MPRSRGGRAAPGPPPPPPPPGQAPRWSRWRVPGRLLLLLLPALCCLPGAARAAAAAAGAGNRAAVAVAVARADEAEAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCGVPDHPHLSRRRRNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGP---GIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFKLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPSTPGTKPNICDG--N--FNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYER-ADGRFV-F-FKGDKYWVFKEVTVEPGYPHSLG-ELGSCLPR--E--GIDTALRWEPVGKTYFFKGERYWRYSEERRATDPGYPKPI-T-V-WKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTINDVPGSVNAVAVVIPCILSLCILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV
34	HHSearch	72.55	41%	-97	- C1 -	4FVL		?	A:[6-368]	--------------------------------------------------------------------------------------------------------------------------------------------------------------RTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLH-------DGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGP---NYGGDAHFDDDETWTSS---SKGYNLFLVAAHAFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDED-----PN---------------------P-K-----HP----KTPDKCDP--SLSLDAITSLRGETMIFKDRFFWRLHPQ-QVDAELFLTKSFWPELPNRIDAAYEHPSHDLIF-I-FRGRKFWALNGYDILEGYPKKIS-EL--GLPKEVK--KISAAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLI-EED-FPGIGDKVDAVYEK--NGYIYFFNGPIQFEYSIWSNRIVRVM---PANSILWC----------------------------------------------------------------------------
33	HHSearch	67.66	45%	-93	- C1 -	3BA0		MMP12_HUMAN	A:[1-365]	---------------------------------------------------------------------------------------------------------------------------------------------------------------GPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKIN-------TGMADILVVFARGAHGDDHAFDGKGGILAHAFGPGS---GIGGDAHFDEDEFWTTH---SGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQ----R---------------------L-PNP----D----NSEPALCDP--NLSFDAVTTVGNKIFFFKDRFFWLKVSE-RPKTSVNLISSLWPTLPSGIEAAYEIEARNQVF-L-FKDDKYWLISNLRPEPNYPKSIH-SF--GFPNFVK--KIDAAVFNPRFYRTYFFVDNQYWRYDERRQMMDPGYPKLITK-N-FQGIGPKIDAVFYSK-NKYYYFFQGSNQFEYDFLLQRIT---KTLKSNSWFGC----------------------------------------------------------------------------
13	PsiBlast_PDB	66.07	39%	-84	- C1 -	4G0D		MMP13_HUMAN	A:[9-343]	-----------------------------------------------------------------------------------------------------------------------------------------------------------------KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRL--HD-----GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGP---NYGGDAHFDDDETWT---SSSKGYNLFLVAAHAFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNP------------------KHPKTPDKCDPSL------------------S--LDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPELPNRIDAAYEH-PSHDLI-FIFRGRKFWALNGYDILEGYPKKIS-ELG--LPK--EVKKISAAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLI-E-EDFPGIGDKVDAVY-EKNG-YIYFFNG--------------------------------------------------------------------------------------------------------
10	PsiBlast_PDB	65.05	40%	-81	- C1 -	1FBL		MMP1_PIG	A:[9-349]	-----------------------------------------------------------------------------------------------------------------------------------------------------------------RWENTHLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVS-------EGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGP---GIGGDAHFDEDERWT---KNFRDYNLYRVAAHELGHSLGLSHSTDIGALMYPNYIY--TGDVQLSQDDIDGIQAIYGPSENPVQPSGP------------------------------------QTPQVCDSKLT--FDAITTLRGELMFFKDRFYMRT-NSFYPEVELNFISVFWPQVPNGLQAAYEI-ADRDEVRF-FKGNKYWAVRGQDVLYGYPKDIHRSFGFPSTV--K--NIDAAVFEEDTGKTYFFVAHECWRYDEYKQSMDTGYPKMI-AEE-FPGIGNKVDAVF-QKDG-FLYFFHGTRQYQFD-------------------------------------------------------------------------------------------------
46	HHSearch	47.61	85%	-90	- C1 -	1RM8		MMP16_HUMAN	A:[1-169]	---------------------------------------------------------------------------------------------------------------------------------------------------------------GQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGP---GIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19	PsiBlast_PDB	39.15	52%	-75	- C1 -	2WO9		MMP12_HUMAN	A:[2-163]	---------------------------------------------------------------------------------------------------------------------------------------------------------------GPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKI-------NTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGS---GIGGDAHFDEDEFWT---THSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18	PsiBlast_PDB	39.11	52%	-76	- C1 -	2WO8		MMP12_HUMAN	A:[2-163]	---------------------------------------------------------------------------------------------------------------------------------------------------------------GPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKI-------NTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGS---GIGGDAHFDEDEFWT---THSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
55	HHSearch	38.67	54%	-73	- C1 -	3AYU		MMP2_HUMAN	A:[3-165]	-----------------------------------------------------------------------------------------------------------------------------------------------------------FFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHD-------GEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGT---GVGGDSHFDDDELWTLGKG--VGYSLFLVAAHAFGHAMGLEHSQDPGALMAPIYTY--TKNFRLSQDDIKGIQELYGAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20	PsiBlast_PDB	38.67	52%	-73	- C1 -	2WOA		MMP12_HUMAN	A:[2-163]	---------------------------------------------------------------------------------------------------------------------------------------------------------------GPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKI-------NTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGS---GIGGDAHFDEDEFWT---THSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
54	HHSearch	38.11	52%	-80	- C1 -	1I76		MMP8_HUMAN	A:[2-163]	-----------------------------------------------------------------------------------------------------------------------------------------------------------LTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-------QGEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTNTS---ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57	HHSearch	36.53	50%	-70	* C1 *	4H1Q		MMP9_HUMAN	A:[3-160]	--------------------------------------------------------------------------------------------------------------------------------------------------------------GDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYS-------RDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGP---GIQGDAHFDDDELWSLGK--GQGYSLFLVAAHQFGHALGLDHSSVPEALMYPMYRFT--EGPPLHKDDVNGIRHLYG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50	HHSearch	34.86	42%	-76	- C1 -	4IN9		?	A:[1-165]	-----------------------------------------------------------------------------------------------------------------------------------------------------------YVLQGSKWNKTTLKYYIYN----LTTTERENAIRSAFALWSDKSTLSFIQVYN------PNQADIKIKWEKGNHGDGYPFDGNTGILAHAFYPPPAGGNYAGHLHFDDDENWSIN---GSGIDLITVAAHEIGHLLGIEHSNVSSALMYPYYTGIKR---QLDNDDCLAVWDLYGYP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
53	HHSearch	34.64	47%	-74	- C1 -	1HV5		MMP11_MOUSE	A:[2-162]	-----------------------------------------------------------------------------------------------------------------------------------------------------------FVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVHE-------GRADIMIDFARYWHGDNLPFDGPGGILAHAFFPKT---HREGDVHFDYDETWTIGDN--QGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTF--RYPLSLSPDDRRGIQHLYG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------