@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : GPR56_HUMAN: (2016-01-10 )
MTPQSLLQTTLFLLSLLFLVQGAHGRGHREDFRFCSQRNQTHRSSLHYKPTPDLRISIENSEEALTVHAPFPAAHPASRSFPDPRGLYHFCLYWNRHAGRLHLLYGKRDFLLSDKASSLLCFQHQEESLAQGPPLLATSVTSWWSPQNISLPSAASFTFSFHSPPHTAAHNASVDMCELKRDLQLLSQFLKHPQKASRRPSAAPASQQLQSLESKLTSVRFMGDMVSFEEDRINATVWKLQPTAGLQDLHIHSRQEEEQSEIMEYSVLLPRTLFQRTKGRSGEAEKRLLLVDFSSQALFQDKNSSQVLGEKVLGIVVQNTKVANLTEPVVLTFQHQLQPKNVTLQCVFWVEDPTLSSPGHWSSAGCETVRRETQTSCFCNHLTYFAVLMVSSVEVDAVHKHYLSLLSYVGCVVSALACLVTIAAYLCSRVPLPCRRKPRDYTIKVHMNLLLAVFLLDTSFLLSEPVALTGSEAGCRASAIFLHFSLLTCLSWMGLEGYNLYRLVVEVFGTYVPGYLLKLSAMGWGFPIFLVTLVALVDVDNYGPIILAVHRTPEGVIYPSMCWIRDSLVSYITNLGLFSLVFLFNMAMLATMVVQILRLRPHTQKWSHVLTLLGLSLVLGLPWALIFFSFASGTFQLVVLYLFSIITSFQGFLIFIWYWSMRLQARGGPSPLKSNSDSARLPISSGSTSSSRI

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70......-----..80....--....90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210--------.......220.......230.......240.......250.......260.......270.......280-----.........290.......300.......310.......320.......330.......340........350.......360.......370.-.......380.......390.......400.......410.......420.......430.......440.......450.......460-.-.----.---.------.--..470.......480.......490.....---..500.......510-.---.------.-.....---.520.......530.......540.......550.......560...--..-------.-------.----570-----........580.......590.......600--------------------......----------.610.......620.......630----.------..---------------....640.......650.......660.......670.......680.......690.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MTPQSLLQTTLFLLSLLFLVQGAHGRGHREDFRFCSQRNQTHRSSLHYKPTPDLRISIENSEEALTVHAPFPAAHPA-----SRSFPDPR--GLYHFCLYWNRHAGRLHLLYGKRDFLLSDKASSLLCFQHQEESLAQGPPLLATSVTSWWSPQNISLPSAASFTFSFHSPPHTAAHNASVDMCELKRDLQLLSQFLKHPQKASRRPSAAPASQQLQSL--------ESKLTSVRFMGDMVSFEEDRINATVWKLQPTAGLQDLHIHSRQEEEQSEIMEYSVLLPRTLFQRTKGR-------SGEAEKRLLLVDFSSQALFQDKNSSQVLGEKVLGIVVQNTKVANLTEPVVLTFQHQLQPKN-VTLQCVFWVEDPTLSSPGHWSSAGCETVR-RE-TQTSCFCNHLTYFAVLMVSSVEVDAVHKHYLSLLSYVGCVVSALACLVTIAAYLCSRVPLPCRRKPRDYTIKVHMNLLLAVFLLDTSFLL-S-E----P---V------A--LTGSEAGCRASAIFLHFSLLTCLSWMGLEG---YNLYRLVVEVFGT---Y---V------P-GYLLK---LSAMGWGFPIFLVTLVALVDVDNYGPIILAVHRTPEGVIYPSMCWIR--DS-------L-------V----SY------ITNLGLFSLVFLFNMAMLATMVVQILRLRPH--------------------TQKWSH----------VLTLLGLSLVLGLPWALIFFSFAS----G------TF---------------QLVVLYLFSIITSFQGFLIFIWYWSMRLQARGGPSPLKSNSDSARLPISSGSTSSSRI
1 PsiBlast_PDB 67.3424%-131 - C3 -4L6R GLR_HUMAN A:[203-384] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAVAGCRVAAVFMQYGIVANYCWLLVEGLYLHNLLGLATLPERS---F---F------S-LYL-------GIGWGAPMLFVVPWAVV----------------KCLFENVQCWTS--ND-------N-------M----GFWW----ILRFPVF-LAILINF-FIFVRIVQLLVAKLR--------------------ARQMHHTDYKFRLAKSTLTLIPLLGVHEVVFAFVTDEHAQ----G------TL---------------RSAKLFFDLFLSSFQGLLVAVLYCFLNKEVQSELRRRWHRWRLGKVLWEERN------
11 HHSearch 61.399%-125 - C3 -2Z73 OPSD_TODPA A:[37-325] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGIFIGICGIIGCGGNGIVIYLFTKT-------KSLQTPANMFIINLAFSDFTFSLVNGF-P-L----M---TISCFLKK--WIFGFAACKVYGFIGGIFGFMSIMTMAMIS---IDRYNVIGRPMAASKKM---S------H-RRAFI---MIIFVWLWSVLWAIGPIFGW-GAYTL---------EG--VLCNCSFD--YI-------SRDSTTRSNILCMFI------LGFFGPILIIFFCYFN----IVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRL----------AKISIVIVSQFLLSWSPYAVVALL----AQFGPLEWV---------------TPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDKDA
15 HHSearch 60.9313%-108 - C3 -1U19 OPSD_BOVIN A:[69-317] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKLRTPLNYILLNLAVADLFMVFGGFT-T-T----L---YTSLHG-Y--FVFGPTGCNLEGFFATLGGEIALWSLVVLA---IERYVVVCKPMSN---FRF-G------E-NHAIM---GVAFTWVMALACAAPPLVG-WSRYIP---------EG--MQCSCGID--YYTPHEETNN-------E----SFVIYMFVVHFIIPLIVIFFCY----GQLVFTVKEAAAQQQESATTQ------------KAEKEV----------TRMVIIMVIAFLICWLPYAGVAFYIFTHQGS----DF---------------GPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTE
22 HHSearch 57.4515%-115 - C3 -2LNL - CXCR1_HUMAN A:[46-315] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YALVFLLSLLGNSLVMLVILYS-------RVGRSVTDVYLLNLALADLLFALTLPI-W-A----A---SKVN---G--WIFGTFLCKVVSLLKEVNFYSGILLLACIS---VDRYLAIVHATRT---L---TQK----R-HLVKF---VCLGCWGLSMNLSLPFFLFR-QAYHP---------NN--SSPVCYEVLGND-------TAK-----WRMVLRILPHT--FGFIVPLFVMLFCY----GFTLRTLFKAH-M--------------------GQKHRA----------MRVIFAVVLIFLLCWLPYNLVLLA----D------TLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG----------------
3 PsiBlast_PDB 57.2340% 31 - C2 -4DLQ A:[324-381] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMDPVIFTVAH-LEAKNHFNANCSFW-NYSERSMLGYWSTQGCRLVESNK-THTTCACSHL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 54.7443% 51 * C2 *4DLO - AGRB3_HUMAN A:[325-368] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CVLWDDS---ESLGTWSTQGCKTVL-TDASHTKCLCDRLSTFAILAQQP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 HHSearch 50.6112% -96 - C3 -3ODU CXCR4_HUMAN (first) A:[53-183] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIYSIIFLTGIVGNGLVILVMGY-------QKKLRSMTDKYRLHLSVADLLFVITLPF-W-A----V---DAVA---N--WYFGNFLCKAVHVIYTVNLYSSVWILAFIS---LDRYLAIVHATNS---QRPRK------L-LAEKV---VYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQ--HI-------M-------V----GL------ILPGIVILSCYCIIISKLSHSGSNIFEMLRI--------------------DEGLRL----------KIYKDTEGYYTIGIGHLLTKSPSL----N------AA---------------KSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALI
4 PsiBlast_PDB 49.4225% -88 - C3 -4K5Y CRFR1_HUMAN (first) A:[13-116] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HYHVAAIINYLGHCISLVALLVAFVLFLRAR-SIRCLRNI------IHANLIAAFILRNATWFV-V-QLTMSP---E------V--HQSNVGWCRLVTAAYNYFHVTNFFWMFGEG---CYLHTAIVLTNIF---E---M------L-RIDEG---LRLKIYKDTEGYYTIGIGHLLTKSPSLSVAKSELDKAIGRNSNGVIT--KD-------E-------A----EK------LFNQDVDAAVRGILRNAKLKPVYDSLDAVRR--------------------SALINM----------VFQMGETGVAGFTNSLRMLQQKRW----D------EA---------------AVNLAKSRWYNQTPNRAKRVIATFRTGTWDAYDRLRAWMFICIGWGVPFPIIVAWAIG
21 HHSearch 46.3813% -86 - C3 -2KS9 NK1R_HUMAN A:[42-164] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVVTSVVGNVVVMWIILA-------HKRMRTVTNYFLVNLAFAEASMAAFNTV-V-N----F---TYAVHN-E--WYYGLFYCKFHNFFPIAAVFASIYSMTAVA---FDRYMAIIHPLQP---R---L------SATATKV---VICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVY--HI-------C-------V----TV------LIYFLPLLVIGYAYTVVGITLWASEIPGDSS--------------------DRYHEQ----------VSAKRKVVKMMIVVVCTFAICWLP----F------HI---------------FFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCP
28 Fugue 44.4010% 169 - C3 -2KZ9 - VATE_YEAST A:[1-69] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------MASAITALTPNQVNDELNKMQAFIRKEAEEKAKEIQLKADQEYEIE--------KTNIVRNETNNIDGNFKSKLKKA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 43.1130% 74 * C4 *1VJZ - ? A:[176-243] -------------------------------------------DGLGYGNIPVDDLTIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLRQKGIEVFCGEMGAYNKTPHDVVLKWLEDLLEIFKTLNIGFALWNFRGPFGILDSERKDVEYEEWYGHKLDRKMLELLRKY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 HHSearch 42.2412% -90 - C3 -3V2Y ENLYS_BPT4 A:[69-197] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFILICCFIILENIFVLLTIWKT-------KKFHRPMYYFIGNLALSDLLAGVAYTA-N-L----L---LSGAT--T--YKLTPAQWFLREGSMFVALSASVFSLLAIA---IERYITMLK-----------N------N-FRLFL---LISACWVISLILGGLPIMGWNCISALSSCSTVLPLYHKHYILFCTTV--FT-------L-------L----LL------SIVILYCRIYSLVRTRNIFEMLRIDEGLRLK--------------------IYKDTE----------GYYTIGIGHLLTKSPSLNAAKSEL----D------KA---------------IGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMG
34 Fugue 40.5710% 26 - C3 -3PLT - LSP1_YEAST A:[51-264] ---------------------------------------------------------------------------------------------------------------GPELARKLSQLVKTEKGVLRAMEVVASERREAAKQLSLWGADNDDDVSDVTDKLGVLIYELGELQDQFIDKYDQYRVTLKSIRNIEASVQPSRDRKEKITDEIAHLKYKDPQSTKIPVLEQELVRAEAESLVAEAQLSNITREKLKAAYSYMFDSLRELSEKFALIAGYGKALLELLDDSPVTPGEARPAYDGYEASRQIIMDAESALESWTLD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 40.0210% -59 - C3 -2RH1 ADRB2_HUMAN (first) A:[69-175] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERLQTVTNYFITSLACADLVMGLAVVP-FGAAH--I---L------MKMWTFGNFWCEFWTSIDVLCVTASIETLCVIA---VDRYFAITSPFKY---Q---SLLT---K-NKARV---IILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAY--AI-------A-------S----SI------VSFYVPLVIMVFVYSRVFQEAKRQLNIFEML--------------------RIDEGL----------RLKIYKDTEGYYTIGIGHLLTKSP----S------LN---------------AAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAA
16 HHSearch 39.3513% -66 - C3 -3PBL DRD3_HUMAN (first) A:[67-177] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RALQTTTNYLVVSLAVADLLVATLVMP-W-V----VYLEVTGG---V--WNFSRICCDVFVTLDVMMCTASIWNLCAIS---IDRYTAVVMPVHY---Q---HGTGQSSC-RRVAL---MITAVWVLAFAVSCPLLFGFNTTGDPTVCSISNPDFVIYSSVVSFYL--PF-------G-------V----TV------LVYARIYVVLKQRRRKNIFEMLRIDEGLRLK--------------------IYKDTE----------GYYTIGIGHLLTKSPSLNAAKSEL----D------KA---------------IGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMG
17 HHSearch 39.1210% -62 - C3 -3UON ACM2_HUMAN (first) A:[52-159] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RHLQTVNNYFLFSLACADLIIGVFSMN-L-YTLY-T---VIG----Y--WPLGPVVCDLWLALDYVVSNASVMNLLIIS---FDRYFCVTKPLTY---PVKRT------T-KMAGM---MIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAVTFG--TA-------I-------A----AF------YLPVIIMTVLYWHISRASKSRINIFEMLRID--------------------EGLRLK----------IYKDTEGYYTIGIGHLLTKSPSLN----A------AK---------------SELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALIN
19 HHSearch 37.6210% -64 - C3 -3EML ENLYS_BPT4 A:[50-154] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNLQNVTNYFVVSLAAADIAVGVLAIPFA-ITI--S---T------G--FCAACHGCLFIACFVLVLTQSSIFSLLAIA---IDRYIAIRIPLRY---N---GLVT---G-TRAKG---IIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMNYM--VY-------F-------N----FF------ACVLVPLLLMLGVYLRIFLAARRQLNIFEML--------------------RIDEGL----------RLKIYKDTEGYYTIGIGHLLTKSP----S------LN---------------AAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAA
20 HHSearch 36.519% -64 - C3 -3RZE ENLYS_BPT4 (first) A:[38-141] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLHTVGNLYIVSLSVADLIVGAVVMPMN-ILY--L---LMS----K--WSLGRPLCLFWLSMDYVASTASIFSVFILC---IDRYRSVQQPLRY---LKY-RT-----K-TRASA---TILGAWFLSFLWVIPILGWNHRREDKCETDFYDVTWFKVMTAIINFY--LP-------T-------L----LM------LWFYAKIYKAVRQHCNIFEMLRIDEGLRLKI--------------------YKDTEG----------YYTIGIGHLLTKSPSLNAAKSELD----K------AI---------------GRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGE
7 PsiBlast_PDB 35.6027% -35 - C3 -4NTJ C562_ECOLX (first) A:[106-170] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CQVTSVIFYFTMYISISFLGLIT---IDRYQKTTRPFKT----------------KNLLGAKILSVVIWAF-MFLLSLPNMILKSEFGLVWHEIVNYICQVIFWINFLIV--IV-------C-------Y----TL------ITKELYRSYVRTADLEDNWETLNDNLKVIEK--------------------ADNAAQ----------VKDALTKMRAAALDAQKATPPKLE----D------FR---------------HGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLRGVGKVRKKVNVKV
30 Fugue 34.9117% 277 - C3 -2RMF - A:[2-41] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNPSLSIDLTFHLLRTLLELARTQSQRERAEQNRIIFDSV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------