@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SA0286: (2016-03-14 )
MTFEEKLSQMYNEIANKISSMIPVEWEKVYTMAYIDDEGGEVFYYYTEPGSNELYYYTSVLNKYDISESEFMDSAYELYKQFQNLRNIFKEEGYEPWTSCEFDFTKEGELKVSFDYIDWINTEFDQLGRQNYYMYKKFGVIPEMEYEMEEVKEIEQYIKEQEEAEQ
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20........30........40.-...-....-50........60........70-.-........80--........90........-100.......110.......120.......130.......140.-..----.---...150.......160....-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
T
F
E
E
K
L
S
Q
M
Y
N
E
I
A
N
K
I
S
S
MIPV
E
W
E
K
V
Y
T
M
A
Y
I
DDEG
G
E
V
-
F
Y
Y
-
Y
TEP-GSN
E
L
Y
Y
Y
T
S
V
L
N
KYDI
S
E
S
E
--
F
-
M
D
S
A
Y
E
L
Y
K
Q
--
F
Q
N
L
R
N
I
F
K
EEGYEPWTS-CEFDFTKEG
E
L
K
V
S
F
D
Y
I
D
W
IN
T
E
F
D
QLGRQN
Y
Y
M
Y
K
K
FGVIP
E
-
M
E
----
Y
---
E
M
E
E
V
K
E
I
E
Q
Y
I
K
E
Q
E
EAEQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
Fugue
97.85
27%
-96
- C6 -
2IA1
1
?
A:
[1-178]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
L
E
K
Q
I
E
S
Y
Y
Q
E
I
A
Q
L
I
I
D
M
I
P
E
E
W
A
E
V
R
F
Y
A
Q
E
D
H
D
G
W
K
I
F
F
F
H
-
Y
L
S
A
-
S
S
D
E
W
T
K
D
I
D
I
R
D
V
I
K
V
P
Q
D
E
--
F
-
M
E
K
Y
N
E
L
S
F
C
--
I
S
D
F
R
K
D
Y
A
E
A
F
G
E
P
W
M
S
-
F
Q
M
T
F
Y
A
S
G
K
F
N
I
D
F
Y
Y
D
K
N
---
P
F
D
T
F
L
T
R
L
A
W
Q
Y
E
H
F
G
T
I
P
D
------------
S
F
Y
K
E
T
L
N
E
Y
L
E
E
K
A
Q
G
K
R
YPFLEPLHHH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33
Fugue
96.42
27%
-90
- C6 -
3I0T
1
?
A:
[2-179]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
L
E
K
Q
I
E
S
Y
Y
Q
E
I
A
Q
L
I
I
D
M
I
P
E
E
W
A
E
V
R
F
Y
A
Q
E
D
H
D
G
W
K
I
F
F
F
H
-
Y
L
S
A
-
S
S
D
E
W
T
K
D
I
D
I
R
D
V
I
K
V
P
Q
D
E
--
F
-
M
E
K
Y
N
E
L
S
F
C
--
I
S
D
F
R
K
D
Y
A
E
A
F
G
E
P
W
M
S
-
F
Q
M
T
F
Y
A
S
G
K
F
N
I
D
F
Y
Y
D
K
N
---
P
F
D
T
F
L
T
R
L
A
W
Q
Y
E
H
F
G
T
I
P
E
-----------
D
S
F
Y
K
E
T
L
N
E
Y
L
E
E
K
A
Q
G
K
R
YPFLEPLHHH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
95.52
28%
-91
- C6 -
3I0T
1
?
A:
[2-169]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
L
E
K
Q
I
E
S
Y
Y
Q
E
I
A
Q
L
I
I
D
M
I
P
E
E
W
A
E
V
R
F
Y
A
Q
E
D
H
D
G
W
K
I
-
F
F
F
H
Y
L
S
A
-
S
S
D
E
W
T
K
D
I
D
I
R
D
V
I
K
V
P
Q
D
E
--
F
-
M
E
K
Y
N
E
L
S
F
C
--
I
S
D
F
R
K
D
Y
A
E
A
F
G
E
P
W
M
S
-
F
Q
M
T
F
Y
A
S
G
K
F
N
I
D
F
-
Y
Y
D
--
K
N
P
F
D
T
F
L
T
R
L
A
W
Q
Y
E
H
F
G
T
I
P
E
-
D
S
----
F
---
Y
K
E
T
L
N
E
---
Y
L
E
E
K
A
Q
G
K
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
94.77
28%
-106
- C6 -
2IA1
1
?
A:
[2-166]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
K
Q
I
E
S
Y
Y
Q
E
I
A
Q
L
I
I
D
M
I
P
E
E
W
A
E
V
R
F
Y
A
Q
E
D
H
D
G
W
K
I
-
F
F
F
-
H
Y
L
S
A
S
S
D
E
W
T
K
D
I
D
I
R
D
V
I
K
V
P
Q
D
E
--
F
-
M
E
K
Y
N
E
L
S
F
C
--
I
S
D
F
R
K
D
Y
A
E
A
F
G
E
P
W
M
S
-
F
Q
M
T
F
Y
A
S
G
K
F
N
I
D
F
Y
Y
D
K
N
---
P
F
D
T
F
L
T
R
L
A
W
Q
Y
E
H
F
G
T
I
P
--
D
S
----
F
---
Y
K
E
T
---
L
N
E
Y
L
E
E
K
A
Q
G
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
93.90
28%
-99
- C6 -
2IA1
1
?
A:
[1-168]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
L
E
K
Q
I
E
S
Y
Y
Q
E
I
A
Q
L
I
I
D
M
I
P
E
E
W
A
E
V
R
F
Y
A
Q
E
D
H
D
G
W
K
I
-
F
F
F
H
Y
L
S
A
-
S
S
D
E
W
T
K
D
I
D
I
R
D
V
I
K
V
P
Q
D
E
--
F
-
M
E
K
Y
N
E
L
S
F
C
--
I
S
D
F
R
K
D
Y
A
E
A
F
G
E
P
W
M
S
-
F
Q
M
T
F
Y
A
S
G
K
F
N
I
D
F
-
Y
Y
D
--
K
N
P
F
D
T
F
L
T
R
L
A
W
Q
Y
E
H
F
G
T
I
P
--
D
S
----
F
---
Y
K
E
T
L
N
E
---
Y
L
E
E
K
A
Q
G
K
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
Fugue
64.29
16%
-51
- C5 -
4GLQ
1
?
A:
[8-156]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
R
D
R
Q
A
I
F
E
T
L
V
A
K
G
R
E
L
L
A
C
D
--
R
V
I
V
Y
A
F
D
D
N
Y
V
G
T
V
-
V
A
E
-
S
V
A
E
-
G
W
P
Q
A
R
-------
D
Q
V
I
E
D
P
C
--
F
-
R
E
H
W
V
E
A
Y
R
Q
G
R
I
Q
A
T
T
D
I
F
K
A
G
L
T
E
C
H
L
N
-
Q
L
R
P
L
------
K
V
R
A
N
L
V
V
P
M
V
I
D
D
Q
L
F
G
---
L
L
I
A
H
Q
A
S
E
P
R
Q
W
Q
E
----
I
---
E
I
D
Q
F
S
E
L
A
S
T
G
S
L
V
L
E
R
L
H
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
40.85
36%
-5
- C6 -
4DOI
-
CFI1_ARATH
A:
[141-181]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
A
--
V
E
K
F
L
E
I
F
K
E
E
T
F
P
P
G
S
S
-
I
L
F
A
L
S
P
T
G
S
L
T
V
A
F
S
K
D
D
S
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
Fugue
40.46
14%
-3
* C5 *
2EZY
-
BAF_HUMAN
A:
[1-89]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
T
T
S
Q
K
H
-
R
D
F
-
V
A
E
P
M
G
E
K
P
V
G
S
L
A
G
I
G
E
V
L
G
K
K
L
E
E
--
R
G
F
D
K
A
Y
V
V
L
G
Q
--
F
L
V
L
K
K
--
D
E
D
L
F
R
E
W
L
K
-
D
T
C
G
A
N
A
K
Q
S
R
D
C
F
G
C
L
R
E
W
C
D
A
F
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
40.13
22%
-19
- C6 -
4BUJ
-
SKI3_YEAST
B:
[1032-1097]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
G
L
K
K
K
D
T
E
F
A
Q
Q
V
L
N
K
L
Q
S
L
A
P
Q
D
S
S
P
W
L
G
M
A
L
I
L
E
E
Q
G
D
I
-
I
--------
G
S
S
K
L
F
A
H
S
F
I
L
S
N
G
R
S
K
A
A
Q
--
F
-
M
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
Fugue
40.06
13%
-6
- C2 -
4KC5
1
?
A:
[8-921]
NELANYIAVI
G
L
G
G
Y
Y
P
GADS
I
D
E
L
W
Q
N
L
A
N
GVDCMSDFPADRWDHSKIYYKNRKVLGKTTCI
N
G
S
F
I
K
DVDKFDYSYFKMP
K
V
Y
A
D
H
MS
P
E
V
R
L
F
L
Q
V
A
V
H
T
F
E
D
A
GYS
K
E
T
L
L
S
R
YNGD
V
G
V
L
L
G
T
MSND
Y
H
Y
Y
G
F
E
S
N
V
F
RG
S
M
A
S
G
S
G
M
A
T
I
P
M
T
V
S
Y
F
Y
GLT
G
P
S
L
F
I
D
TMCS
S
S
S
T
C
I
H
T
A
C
Q
M
L
K
H
DETK
M
V
L
A
G
G
L
N
L
M
YH
P
Y
T
T
V
N
T
S
Q
G
NFTSITSESVNSYGVGAD
G
T
V
I
G
E
G
I
G
A
V
L
L
K
R
L
D
R
A
I
A
D
RDQIYGVIK
G
S
A
M
T
N
AGERNGFNVPN
P
D
L
Q
T
L
A
I
R
Q
A
M
D
Q
A
KVHPSSISYIEGHGSGT
K
L
G
D
P
I
E
V
L
G
L
N
N
A
F
RWATDDKQF
C
Y
L
G
S
IKSNIGHLLAA
S
G
I
A
G
L
T
K
T
L
L
Q
F
K
H
K
Q
I
A
P
SIHSSQLNQDIDFADTP
F
V
V
P
QQLIEWRQPERIING
R
K
Q
V
F
P
R
R
A
G
L
T
S
I
A
AG
G
M
N
A
H
M
I
V
E
E
Y
P
E
P
ADSA
G
Q
I
S
EDQ
L
V
F
V
F
S
V
HKLAL
L
A
Q
N
L
T
S
F
R
D
W
L
A
S
SEAP
L
A
Q
I
A
Y
T
L
Q
VGKNNLR
N
R
L
A
I
R
C
RT
R
Q
A
L
S
R
A
L
N
A
C
I
D
GHYQSSAD
S
K
I
F
Y
R
FQESDAVQPLE
S
D
L
N
D
P
L
A
P
L
L
T
Q
W
L
N
G
D
S
Q
---
V
D
W
A
S
L
Y
A
Q
P
P
V
R
I
S
L
P
A
Y
-
R
F
E
-
K
T
R
C
-
W
Y
T
E
E
G
Y
E
S
S
I
V
N
P
L
M
F
K
N
K
L
HP
L
-
V
A
K
N
C
S
T
P
Q
P
--
G
A
I
F
R
T
D
F
V
E
D
E
L
--------
L
D
Y
V
Y
S
G
R
G
G
R
R
L
S
A
F
N
F
A
D
V
A
L
A
M
P
A
L
A
S
R
F
D
G
R
T
L
S
V
S
C
A
-
F
E
----
H
YIA
D
W
T
T
V
T
G
L
E
Y
R
L
F
E
I
D
S
E
Q
L
E
L
E
F
D
F
R
R
SGE
Q
P
T
H
L
G
F
A
V
I
N
P
L
T
SDEPPLP
Q
Q
W
L
D
D
A
R
E
L
L
N
R
Q
A
L
QA
G
R
Q
L
S
A
A
E
V
S
Q
R
L
A
Q
A
GYDFAPYLDH
D
G
E
L
T
I
G
RS
G
L
V
L
K
G
R
P
P
VNRHNHYADNVQLS
P
Y
L
A
T
T
I
D
K
A
L
Y
L
L
L
D
E
L
GLPQ
G
R
V
I
V
R
N
I
E
RLCCYHTPA
G
G
F
S
V
V
L
SG
I
G
L
N
DN
E
L
S
L
S
L
L
V
L
D
EREQICVKLD
K
V
S
L
Y
L
G
K
Q
E
V
A
S
VDRKHSLLT
36
Fugue
38.02
12%
18
- C5 -
2UWJ
1
PSCG_PSEAE
G:
[2-114]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
T
S
L
I
R
E
L
A
E
L
A
L
A
G
S
G
Q
------------
H
C
H
E
E
A
L
C
I
-
A
E
W
-
L
E
R
L
-
G
Q
D
E
A
A
R
L
I
R
I
S
S
L
A
N
Q
G
R
-------------
Y
Q
E
--
A
L
A
F
A
H
G
N
P
W
P
A
L
E
P
W
F
A
L
C
E
W
H
L
G
L
G
A
A
L
D
R
R
L
A
G
L
G
-------------------------------------
G
S
S
D
P
A
L
A
D
F
A
A
G
M
R
A
Q
V
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
35.71
40%
48
- C9 -
1XUU
2
?
A:
[18-42]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
E
P
L
I
I
-
C
E
I
G
I
N
H
E
G
S
L
K
T
A
F
E
M
V
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
35.64
40%
55
- C9 -
4IPJ
2
?
A:
[20-44]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
E
P
L
I
I
-
C
E
I
G
I
N
H
E
G
S
L
K
T
A
F
E
M
V
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
35.53
33%
31
- C6 -
1QS1
-
?
A:
[259-317]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
G
T
L
K
K
S
L
D
F
K
N
D
I
N
A
E
A
H
S
W
G
M
K
N
Y
E
E
W
A
K
D
L
T
D
S
Q
-
R
E
A
L
D
G
Y
---
A
R
Q
D
Y
K
E
I
N
N
Y
L
R
N
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
35.07
40%
37
- C9 -
2ZDR
2
?
A:
[18-42]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
E
P
L
I
I
-
C
E
I
G
I
N
H
E
G
S
L
K
T
A
F
E
M
V
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
34.94
40%
42
- C9 -
3CM4
1
?
A:
[18-42]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
E
P
L
I
I
-
C
E
I
G
I
N
H
E
G
S
L
K
T
A
F
E
M
V
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
34.72
40%
46
- C9 -
4IPI
1
?
A:
[20-44]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
E
P
L
I
I
-
C
E
I
G
I
N
H
E
G
S
L
K
T
A
F
E
M
V
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
34.51
40%
47
* C9 *
2WQP
1
?
A:
[18-42]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
E
P
L
I
I
-
C
E
I
G
I
N
H
E
G
S
L
K
T
A
F
E
M
V
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
33.42
40%
57
- C9 -
1XUZ
2
?
A:
[18-42]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
E
P
L
I
I
-
C
E
I
G
I
N
H
E
G
S
L
K
T
A
F
E
M
V
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
33.41
33%
25
- C6 -
1QS2
1
?
A:
[198-256]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
G
T
L
K
K
S
L
D
F
K
N
D
I
N
A
E
A
H
S
W
G
M
K
N
Y
E
E
W
A
K
D
L
T
D
S
Q
-
R
E
A
L
D
G
Y
---
A
R
Q
D
Y
K
E
I
N
N
Y
L
R
N
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------