@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : SA0660: (2016-03-17 )
MVLSIRSQIIIGVVSSILLTSTILAIAYILMWFNGHMTLTLTLTTIITSCLTLLICSIFINPLIQKIKQFNIKTKQFANGNYASNDKTFNSPKEIYELNQSFNKMASEITQQMNQIKSEQQEKTELIQNLAHDLKTPLASIISYSEGLRDGIITKDHEIKESYDILIKQANRLSTLFDDMTHIITLNTGKTYPPELIQLDQLLVSILQPYEQRIKHENRTLEVNFCSEIDAFYQYRTPLERILTNLLDNALKFSNVGSRIDINISENKDQDTIDIAISDEGIGIIPELQERIFERTFRVENSRNTKTGGSGLGLYIANELAQQNNAKISVSSDIDVGTTMTVTLHKLDITS

Atome Classification :

(22 SA) ----------------------------------.........10..--......20........30........40-----.........50........60........70........80........90........100......---------.110..-.....120---........130.......140.......--150..-..----.----..160.-......170......---.180.----......190-.-..-.....--200...--....---210.....---..-----220..-------.....-.230...-..-..240.......250..--.....------260.....-..270.......280.......290.......300.......310.......320.......330.......340.......350
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------MVLSIRSQIIIGV--VSSILLTSTILAIAYILMWFNGHMTLT------LTLTTIITSCLTLLICSIFINPLIQKIKQFNIKTKQFANGNYASNDKTFNSPKEIYELNQSFNKMASE---------ITQQMN-QIKSEQQ----EKTELIQNLAHDLKTPLASIISYSEGLR--DGIIT-KD----H----EIKESY-DILIKQANRLSTLFD---DMTHI----ITLNTGK-T-Y-PP-ELIQL--DQLLVS--ILQP---YEQRIKHE---NR-----TL-EV-------NFCSE-IDAFYQY-RT-PLERILTNLLDNALKFS--NVGSR------IDINISEN-KDQDTIDIAISDEGIGIIPELQERIFERTFRVENSRNTKTGGSGLGLYIANELAQQNNAKISVSSDIDVGTTMTVTLHKLDITS-
2 PsiBlast_PDB 90.9328%-104 - C1 -4U7O ? A:[26-260] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEQQKIDNDRKQFVSNVSHELRTPLTSLRSYIEALS--DGAW--KD----P----EVAPGFLKVTQEETDRMIRMIN---ELLSL----SRMDSGT-T-R-VDMELVNI--NEMFNY--VLDR---FDMILKKD---DNPAKYYTI-KR-------EFTKR--DLWVEI-DTDKFTQVLDNIMNNAIKYS--PDGGV------VTCRLLET-HNQ--VIISISDQGLGIPRADLGHVFDRFFRVDK-----QGGTGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISL--------
1 PsiBlast_PDB 82.0928%-103 - C1 -4U7N - ? A:[39-260] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSNVSHELRTPLTSLRSYIEALS--DGAW--KD----P----EVAPGFLKVTQEETDRMIRMIN---ELLSL----SRMDSGT-T-R-VDMELVNI--NEMFNY--VLDR---FDMILKKD---DNYY---TI-KR-------EFTKR--DLWVEI-DTDKFTQVLDNIMNNAIKYS--PDGGV------VTCRLLET-HNQ--VIISISDQGLGIPRADLGHVFDRFFR-----------TGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISL--------
8 PsiBlast_PDB 79.7125% -65 - C1 -4BIV CPXA_ECOLI A:[40-292] ---------------------------------------------------------------------------------------------------------------------EVAQGNLRQHPELEAGPQEFLAAGASFN----------------QMVT-ALERMMT----SQQRLLSDISHELRTPLTRLQLGTALLR------R-RS----G----ESKE-L-ERIETEAQRLDSMIN---DLL-V----MSRNQQKNA-L-VS-ETIKA--NQLWSE--VLDN---AAFEAEQM---GK-----SL-TV-------NFPPG-PWPLYGN-PN-ALESALENIVRNALRYS--H--TK------IEVGFA---VDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWL--------
31 HHSearch 78.6226% -98 - C- -2C2A ? A:[16-250] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDR----MKTEFIANISHELRTPLTAIKAYAETIY--NSLGELDL----S----TLKEFL-EVIIDQSNHLENLLN---ELLDF----SRLERKS-LQI-NR-EKVDL--CDLVES--AVNA---IKEFASSH---NV-----NV-LF-------ESNVPCPVEAYID-PT-RIRQVLLNLLNNGVKYS--KKDAPD-----KYVKVILD-EKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDRA---
5 PsiBlast_PDB 77.1626% -77 - C1 -4BIX CPXA_ECOLI A:[61-292] ------------------------------------------------------------------------------------------------------------------------------------------AAGASFNQVVTA---------LERMMT----SQQR--------LLSDISHELRTPLTRLQLGTALLR------R-RS----G----ESKE-L-ERIETEAQRLDSMIN---DLL-V----MSRNQQKNA-L-VS-ETIKA--NQLWSE--VLDN---AAFEAEQM---GK-----SL-TV-------NFPPG-PWPLYGN-PN-ALESALENIVRNALRYS--H--TK------IEVGFA---VDKDGITITVDDDGPGVSPEDREQIFRPFYRTD--------GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWL--------
4 PsiBlast_PDB 76.0026% -64 - C1 -4BIW CPXA_ECOLI A:[52-292] ---------------------------------------------------------------------------------------------------------------------------------LEAGPQEFLAAGASFNQVVTA---------LERMMT----SQQR--------LLSDISHELRTPLTRLQLGTALLR------R-RS----G----ESKE-L-ERIETEAQRLDSMIN---DLL-V----MSRNQQKNA-L-VS-ETIKA--NQLWSE--VLDN---AAFEAEQM---GK-----SL-TV-------NFPPG-PWPLYGN-PN-ALESALENIVRNALRYS--H--TK------IEVGFA---VDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWL--------
6 PsiBlast_PDB 75.5026% -80 - C1 -4BIY CPXA_ECOLI A:[61-292] ------------------------------------------------------------------------------------------------------------------------------------------AAGASFNQVVTA---------LERMMT----SQQR--------LLSDISHELRTPLTRLQLGTALLR------R-RS----G----ESKE-L-ERIETEAQRLDSMIN---DLL-V----MSRNQQKNA-L-VS-ETIKA--NQLWSE--VLDN---AAFEAEQM---GK-----SL-TV-------NFPPG-PWPLYGN-PN-ALESALENIVRNALRYS--H--TK------IEVGFA---VDKDGITITVDDDGPGVSPEDREQIFRPFYRTD---------TGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWL--------
9 PsiBlast_PDB 75.3625% -56 - C1 -4CB0 CPXA_ECOLI A:[57-292] --------------------------------------------------------------------------------------------------------------------------------------QEFLAAGASFN----------------QMVT-ALERMMT----SQQRLLSDISHELRTPLTRLQLGTALLR------R-RS----G----ESKE-L-ERIETEAQRLDSMIN---DLL-V----MSRNQQKNA-L-VS-ETIKA--NQLWSE--VLDN---AAFEAEQM---GK-----SL-TV-------NFPPG-PWPLYGN-PN-ALESALENIVRNALRYS--H--TK------IEVGFA---VDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWL--------
7 PsiBlast_PDB 74.4926% -66 - C1 -4BIZ CPXA_ECOLI A:[62-292] -------------------------------------------------------------------------------------------------------------------------------------------AGASFNQMVTA---------LERMMT----SQQR--------LLSDISEELRTPLTRLQLGTALLR------R-RS----G----ESKE-L-ERIETEAQRLDSMIN---DLL-V----MSRNQQKNA-L-VS-ETIKA--NQLWSE--VLDN---AAFEAEQM---GK-----SL-TV-------NFPPG-PWPLYGN-PN-ALESALENIVRNALRYS--H--TK------IEVGFA---VDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRE--GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWL--------
12 PsiBlast_PDB 72.2027% -42 - C1 -4JAV ? A:[7-247] ----------------------------------------------------------------------------------------------------------------------------------------------------------------SKELE-RLKRIDR----MKTEFIANISHELRTPLTAIKAYAETIY--NSLGE-LDL---S----TLKEFL-EVIIDQSNHLENLLNELLDFSRLERKSLQINREK-V------DLCDL--VESAVN--AIKE---FASS-HNV---NV-----LF-ES-------NVPCP-VEAYID--PT-RIRQVLLNLLNNGVKYSKKDAPDK------YVKVILDE-KDGGVL-IIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK------
18 PsiBlast_PDB 72.0423% -65 - C1 -4Q20 - DIVL_CAUCR A:[25-253] -----------------------------------------------------------------------------------------------------------------------------------------------------A---------LADRSA-ALAEAER----LKRDFVGNVSYELRTPLTTIIGYSELLERAD--SE-RG-----------RNHV-AAVRAAATQLARSID---DVLDM----AQIDAGE-M-A------LEI--EDIRVSDLLLNA---QERALKDAQLGGV-----TL-AV-------ECEED-VGLIRGD-GK-RLAQTLDHLVENALRQT--PPGGR--------VTLSAR-RALGEVRLDVSDTGRGVPFHVQAHIFDRFV------GRDRGGPGLGLALVKALVELHGGWVALESEPGNGSTFTCHL--------
3 PsiBlast_PDB 71.0528% -69 - C1 -4I5S - ? A:[211-431] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FVSNVSHELRTPLTSVKSYLEALD--DGALT-E----------SVAPSFIKVSLDETNRMMRMIT---DLLSL----SR------S-HLDV-ELTNF--TAFMNY--ILDR---FDQIQSQQST-----------EIIRDYPDKSVWIE-IDT------D-KMTQVIDNILNNAIKYS--PDGGK------VTITMQTT-DTQ--LILSISDQGLGIPKKDLPLIFDRFYRVDKAR-------GLGLAIAKEIVKQHKGFIWANSEEGEGSTFTIVL--------
56 Fugue 70.9416% -72 - C1 -1GKZ BCKD_RAT A:[38-378] ----------------------------------VRLTPTMMLYSGRSQDGSHLLKSGRYLQQELPVRIAHRIKGF------RSL------------------------------------------PFIIGCNPTILHVHELYIRAFQK---------LTDFPPIKDQADEA----QYCQLVRQLLDDHKDVVTLLAEGLRESR--K-HIE-DE----K----LVRYFL-DKTLTSRLGIRMLAT---HHLAL----HEDKPDF-VGI-IC-TRLSP--KKIIEK--WVDF---ARRLCEHK---YG-----NAPRV-------RINGH-VAARFPFIPM-PLDYILPELLKNAMRAT--MESHLDTPYNVPDVVITIA-NNDVDLIIRISDRGGGIAHKDLDRVMDYHFT-----TAPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREE
11 PsiBlast_PDB 70.6227% -43 - C1 -3DGE ? A:[14-247] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDR----MKTEFIANISHELRTPLTAIKAYAETIY--NSLGE-LDL---S----TLKEFL-EVIIDQSNHLENLLNELLDFSRLERKSLQINREK-V------DLCDL--VESAVN--AIKE---FASS-HNV---NV-----LF-ES-------NVPCP-VEAYID--PT-RIRQVLLNLLNNGVKYSKKDAPDK------YVKVILDE-KDGGVL-IIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK------
15 PsiBlast_PDB 70.3027% -54 - C1 -4JAU ? A:[7-247] ----------------------------------------------------------------------------------------------------------------------------------------------------------------SKELE-RLKRIDR----MKTEFIANISHELRTPLTVIKGYAEMIY--NSLGE-LDL---S----TLKEFL-ETIIEQSNHLENLLNELLDFSRLERKSLQINREK-V------DLCDL--VESAVN--AIKE---FASS-HNV---NV-----LF-ES-------NVPCP-VEAYID--PT-RIRQVLLNLLNNGVKYSKKDAPDK------YVKVILDE-KDGGVL-IIVEDNGIGIPDHAKDRIFEQFYRVDS---------GLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK------
13 PsiBlast_PDB 70.1727% -58 - C1 -2C2A ? A:[7-247] ----------------------------------------------------------------------------------------------------------------------------------------------------------------SKELE-RLKRIDR----MKTEFIANISHELRTPLTAIKAYAETIY--NSLGE-LDL---S----TLKEFL-EVIIDQSNHLENLLNELLDFSRLERKSLQINREK-V------DLCDL--VESAVN--AIKE---FASS-HNV---NV-----LF-ES-------NVPCP-VEAYID--PT-RIRQVLLNLLNNGVKYSKKDAPDK------YVKVILDE-KDGGVL-IIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK------
53 Fugue 69.8920% -57 - C1 -4I5S - ? A:[37-432] NNNQVKQLNAKVRSLITGHYTDKLKVEDNSDLSELVNNVNDLSEVFR--LTHENLAQEKNRLTSILSYMTDGVLATDRSGKITVINDMAQKQLNVTREQALECNILDILDDDSYTYNDLITKTPEIVLTRRDEYDEFITLRIRFALNRRESGFISGLIAVLHDAT-EQEKEER----ERRLFVSNVSHELRTPLTSVKSYLEALD--DGAL--TE----S----VAPSFI-KVSLDETNRMMRMIT---DLLSL--------SRS-H-L-DV-ELTNF--TAFMNY--ILDR---FDQIQSQQ---ST-----EI-IR-------DYPDK-SVWIEID-TD-KMTQVIDNILNNAIKYS--PDGGK------VTITMQTT-DTQ--LILSISDQGLGIPKKDLPLIFDRFYRVDKAR-------GLGLAIAKEIVKQHKGFIWANSEEGEGSTFTIVLP-------
16 PsiBlast_PDB 69.2123% -60 - C1 -4KP4 ENVZ_ECOLI A:[9-222] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AD----DRTLLMAGVSHDLRTPLTRIRAYAETIY--NSLGE-LDLSTLK----ELAESI-NKDIEECNAIIEQFI---DY---------LRTGQ-E-M-PM-EMADL--NAVLGE--VIAAESGYEREIETALY-PG-----SI-EV-------KM----------H-PL-SIKRAVANMVVNAARYG--NGW----------IKVSSG-TEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTIS--GTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWL--------
14 PsiBlast_PDB 67.0027% -41 - C1 -4JAS ? A:[13-247] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------LKRIDR----MKTEFIANISHELRTPLTVIKGYAEMIY--NSLGE-LDL---S----TLKEFL-ETIIEQSNHLENLLNELLDFSRLERKSLQINREK-V------DLCDL--VESAVN--AIKE---FASS-HNV---NV-----LF-ES-------NVPCP-VEAYID--PT-RIRQVLLNLLNNGVKYSKKDAPDK------YVKVILDE-KDGGVL-IIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK------
19 PsiBlast_PDB 64.5922% -69 - C1 -4GCZ FIXL_BRADU (first) A:[154-373] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EMASALAHELNQPLAAISNYMKGSR--RLLAG-SS----DPNTPKVESAL-DRAAEQALRAGQIIR---RLRDF----VARGESE-K-R-VE-SLSKLIEEAGALG--LAGA---REQNVQ-------------L-RF-------SLDPG-ADLVLAD-RV-QIQQVLVNLFRNALEAM--AQSQR------RELVVTNTPAADDMIEVEVSDTGSGFQDDVIPNLFQTFF------TTKDTGMGVGLSISRSIIEAHGGRMWAESNASGGATFRFTLPAAD----
10 PsiBlast_PDB 60.5640% -80 - C1 -3SL2 A:[46-149] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVLDNIISNALKYS--PEGGH------VTFSIDVN-EEEELLYISVKDEGIGIPKKDVEKVFDRFYRVD------LGGTGLGLAIAKEMVQAHGGDIWADSIEGKGTTITFTL--------
37 HHSearch 59.8735% -74 - C1 -3SL2 A:[34-153] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLYVEID-QD-KITQVLDNIISNALKYS--PEGGH------VTFSIDVN-EEEELLYISVKDEGIGIPKKDVEKVFDRFYRVD------LGGTGLGLAIAKEMVQAHGGDIWADSIEGKGTTITFTLPYKE----