@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SA1640: (2016-03-27 )
MRRLLSLLLASTMILVACGNANNENKKKEDEKKSEVKKEATKNNDKPKNEKKNQDINKNNNEQVQNVNNKQPVLNNNSNHNNQQQSNKNNYTVIENGNTVTEIYNGQSHTTTNNPIREEYVEGETDPIYKREYKHFYTPEEAQRAQENSDQILREMGLEPERYE
Atome Classification :
(20 SA)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10-------------........20------.........30-----------.........40........50......--..60........70---........----.80........90.....--...100---.........110.......120.......130.....-----..140.....-..150----.........160..----------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
R
R
L
L
S
L
L
L
A
S
-------------
T
M
I
L
V
A
CGN-------ANNENKK
K
E
D
------------
E
K
K
S
E
V
K
K
E
ATKNNDKPKNEKKNQDIN--KNN
N
E
Q
V
QNVNNK----QPVLNNNS----NHNNQQQSNKN
N
Y
T
V
I
EN--G
N
T
V
-----
T
E
I
YNGQSHTTTNN
P
I
R
E
E
YVEGETD
P
I
Y
K
R
E
Y
K
HFY-----T
P
E
E
A
Q
R
AQE-
N
S
D
------
Q
I
L
R
E
MGLEPERYE----------------------------------------------------------------------------------------------------------------------------------------------------
87
Fugue
78.96
18%
37
- C3 -
4OBX
2
COQ5_YEAST
A:
[23-257]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S
V
A
N
R
Y
D
L
M
N
D
V
M
S
L
GI
H
R
L
W
K
D
H
F
I
N
K
L
DAGKRPNST
T
P
L
N
F
I
D
V
A
G
G
S
G
D
I
A
F
G
L
L
D
H
A
E
S
K
F
G
D
TE
S
T
M
D
I
V
D
IN
P
D
M
L
K
E
G
E
K
R
A
M
E
Q
G
K
Y
F
K
D
P
R
--
V
R
F
L
--
V
S
N
G
E
K
L
E
E
I
D
S
D
----
S
K
D
I
Y
T
V
S
FGIR
N
F
T
D
I
Q
K
G
L
N
T
A
Y
R
V
L
K
P
--
G
G
I
F
Y
C
L
E
F
S
K
I
E
N
P
L
M
D
F
A
Y
Q
Q
W
A
K
V
L
P
V
M
G
S
M
I
A
N
D
Y
D
S
Y
Q
Y
L
V
-----
E
S
I
E
R
F
P
D
Q
E
-
T
F
K
------
S
M
I
E
K
A
G
F
K
S
A
G
Y
E
S
L
TFGI
C
A
I
H
W
G
I
K
V-------------------------------------------------------------------------------------------------------------------------------------
83
Fugue
67.38
12%
46
- C3 -
4K70
22
?
A:
[2-483]
PG
S
M
E
A
L
V
R
A
L
E
EADHAV
A
T
V
V
Q
S
R
I
L
E
F
F
M
AA
G
R
E
T
P
A
G
V
R
G
L
W
A
R
A
L
R
L
A
C
R
A
Y
V
E
TGT
C
E
A
A
V
L
A
E
N
L
A
G
L
A
L
W
RLRHDWDEGT
A
P
L
L
E
L
L
G
V
V
N
G
D
D
T
T
A
A
L
T
E
A
GLRTSAEFG
P
D
A
M
F
R
L
V
S
E
W
C
A
A
F
D
E
A
L
AGARS
A
D
D
V
L
A
A
P
R
V
V
P
PEQTARALVQPRFATLYDM
D
F
V
Q
D
G
L
R
Y
V
A
Q
H
TNWA
L
P
L
A
L
A
V
R
Q
M
Q
NEGLK
P
L
T
R
A
L
F
A
L
T
I
A
D
-------------
E
F
F
-----------------------------------------------------
H
D
R
Q
N
P
T
L
R
--
E
Q
F
A
E
A
A
R
A
V
D
E
A
----
A
L
V
P
V
G
E
V
----
N
A
T
P
R
T
A
V
E
V
R
V
S
A
A
L
A
H
--
G
D
A
Y
-----
V
R
--
E
L
R
P
G
T
V
A
R
R
L
R
T
D
Q
G
V
L
A
L
L
D
P
--
G
A
Q
A
V
H
V
A
-----
A
A
A
D
L
D
H
T
Q
V
-
D
A
T
------
G
V
W
E
A
V
Q
A
S
A
S
P
L
Q
V
V
E
A
L
V
T
A
GFT
R
R
H
C
D
L
L
E
R
A
V
L
D
R
APRLT
D
A
Q
R
A
V
G
C
T
A
V
V
G
G
V
V
H
R
L
LDDYGPG
L
D
Y
V
R
A
Y
T
D
V
A
D
T
LEPLYGDVTAALGLPEK
G
V
E
H
V
V
R
H
C
MAPRPPT
E
H
V
G
A
A
R
A
A
L
L
R
E
V
A
A
A
E
R
R
A
GLAHS
A
A
R
E
A
L
N
T
W
L
A
F
R
A
Q
S
R
WGL
15
PsiBlast_PDB
67.27
29%
-9
- C4 -
1JWY
-
MYS2_DICDI
A:
[708-748]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
65.14
29%
-10
- C4 -
1FMV
-
MYS2_DICDI
A:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
64.98
29%
-7
- C4 -
1G8X
-
ACTNA_DICDI (first)
A:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
63.90
29%
-4
- C4 -
1JX2
-
MYS2_DICDI
A:
[708-748]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
63.47
29%
-5
- C4 -
1D1C
-
MYS2_DICDI
A:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
63.31
29%
-10
- C4 -
1D0X
-
MYS2_DICDI
A:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
63.02
29%
-11
- C4 -
1FMW
-
MYS2_DICDI
A:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
62.50
29%
-9
- C4 -
1D0Y
-
MYS2_DICDI
A:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
62.19
29%
-9
- C4 -
1D0Z
-
MYS2_DICDI
A:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
62.16
29%
-15
- C4 -
1MMD
-
MYS2_DICDI
A:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
91
Fugue
62.05
12%
73
- C2 -
1T62
-
?
A:
[1001-1166]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
K
N
V
E
------------
V
F
W
Q
N
F
L
D
K
H
E
L
D
M
L
M
P
D
V
W
M
F
G
D
G
S
S
--
E
M
G
N
R
L
G
Q
L
V
V
S
G
RKT
A
T
C
S
S
L
D
I
Y
----
K
M
E
E
E
Q
L
P
K
A
G
Q
Y
D
I
I
L
D
GQ
S
Q
P
L
-----
A
I
I
R
T
T
K
V
E
I
M
P
M
N
K
V
S
E
S
F
A
Q
A
E
G
L
D
Y
W
Y
E
E
H
A
R
F
F
-----
K
E
E
L
A
P
Y
Q
L
Q
-
F
Y
P
DMLLV
C
Q
S
F
E
V
V
D
L
Y
T
H
H
H
H
H---------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
61.97
29%
-14
- C4 -
1MNE
-
MYS2_DICDI
A:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
61.83
29%
-8
- C4 -
3MYL
-
MYS2_DICDI
X:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
61.63
29%
2
- C4 -
1D1A
-
MYS2_DICDI
A:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
59.26
29%
9
- C4 -
1D1B
-
MYS2_DICDI
A:
[697-737]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LN---
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
82
Fugue
58.09
15%
57
- C3 -
1F9A
1
NADM_METJA
A:
[1-164]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L
R
G
F
I
I
G
RFQPFH
K
G
H
L
E
V
I
K
K
I
A
E
E
V
-------------
D
E
I
I
I
G
I
G
S
-------
A
Q
K
S
H
T
L
E
N
P
------------
F
T
A
G
E
R
I
L
M
I
T
Q
S
L
K
D
Y
D
L
T
Y
Y
P
I
P
I
K
DI
E
F
N
S
I
W
V
S
Y
V
E
S
L
----
T
P
P
F
D
I
V
Y
----
S
G
N
-----
P
L
V
R
V
L
F
E
E
R
--
G
Y
E
V
-----
K
R
P
E
M
F
N
R
K
E
Y
S
G
T
E
I
R
R
R
M
L
N
G
E
-------
K
W
E
H
L
V
-----
P
K
A
V
V
D
V
I
K
E
I
K
G
V
------
E
R
L
R
K
L
A
-----------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
58.09
29%
-15
- C4 -
4AE3
-
MYS2_DICDI
A:
[696-736]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
56.68
29%
-21
- C4 -
2Y8I
-
MYS2_DICDI
X:
[696-736]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
A
D
F
V
K
R
Y
Y
LLAPN
V
P
R
D
A
E
D
S
Q
K
-
A
T
D
------
A
V
L
K
H
L
N
I
D
P
E
Q
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------