@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Lmo0254: (2016-03-13 )
MFGRKKVSIPEEYQRFNQFSADKERLLCIGAFTTECKHKVETKLDGSNKMLKLYYPKNQAAKVMKYWLPMFGINDGYSAVEVITNWIQANDYSGMIAANTTNKVIRIVTKASQKEGLDETSLVAAANKVKTYGAFDLDRLGYIVRVCYSLDLINEEQAWDFFEELWGAATMHFDDWDEYCVSYLNGEEGLDTNWYSDGVKAYVALRKDAASLLNKYQLKN
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10....------....20.-----------......-.-30..-.------...---------..40........50-....-------..--------------------..60------..-..-----...---..70-----...---.....80........90---...-...-...----100-------.......110-----..-......-.120.......130-------------.....-..140-----.......150------..----.-..-----....160...-------.------.----------------------------------..170.--......180-------...---------------------......190...-.---------...----200..-...-..210.......220----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFGRKKVSI
P
E
E
Y
Q
R
------
F
N
QFSAD-----------K
E
R
L
L
C
-
I
-GAF
T
-
T
------
E
CK---------
H
K
V
E
T
KLDGSN
K
M
L
-
K
L
YY-------PK--------------------
N
Q
A
-------
A
K
-
V
M
-----
K
Y
W
---
L
P
MF-----GIN---D
G
Y
S
A
V
E
V
I
T
N
W
I
QAN----DYS-
G
M
I
-AAN----TTN-------
K
V
I
R
I
V
TK-------AS-QKEGL
D
-
E
T
S
L
V
A
A
ANK
V
K
TY-------------GAF
D
L
-
D
R
L
G
Y
-----
I
V
R
V
C
Y
S
L--------DL----I-
N
E
-----
E
Q
A
W
D
F
F
E
E
L
-------W------G----------------------------------
A
A
TMHF--D
D
W
D
E
Y
C
---------
V
S
Y---------------------LNGEEGLDTNWY-S---------D
G
V
----
K
A
Y
V
A
-
L
R
K
-
D
A
A
S
L
L
N
K
YQLKN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
Fugue
77.21
15%
-43
- C6 -
3M1G
5
?
A:
[29-361]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N
Y
I
D
D
R
I
V
ADV
P
A
G
S
E
P
I
A
Q
E
D
G
T
F
H
------
W
P
V
-
E
A
G
-----------
R
Y
R
L
V
A
-
A
-
R
A
C
P
-
W
------
A
H
R
---------
T
V
I
T
R
R
L
L
G
L
E
N
V
I
-
S
L
G
L
-------
T
G
P
T
HDITVPALVEESSKKVVT
N
D
Y
-------
P
S
-
I
T
-----
I
D
F
---
N
L
E
W
-----
K
Q
F
---
H
R
E
G
A
P
N
L
Y
P
A
E
L
R
E
E
M
---
A
P
V
M
K
R
I
-
F
T
E
----
V
N
N
-------
G
V
Y
R
T
G
F
A
-------
G
S
-
Q
E
A
H
N
E
A
Y
K
R
L
W
V
A
L
D
W
L
E
D
R
L
S
TRRYLMGDHI-
T
E
A
D
I
-
R
L
Y
P
T
-----
L
V
R
F
D
A
V
Y
HGHFKCGR
N
K
----
I
-
T
E
M----
P
N
L
W
G
Y
L
R
D
L
-------
F
------
Q
TPGF------------------------------
G
D
T
T
D
F
--
T
E
I
K
Q
H
Y
---------
Y
I
T
HAEINPTRIVPVGPDLSGFAT
P
H
G
R
E
K
L
G
G
S
P
F
-
A
---------
E
G
V
----
T
L
P
G
P
-
I
P
A
G
E
E
V
K
N
P
E
P
F
Q
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
76.88
23%
-43
- C5 -
3PQA
2
LADH_METJA
A:
[128-295]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
E
P
V
G
I
-
V
-
G
A
I
T
-
P
FNF
P
L
N
L
S
A
---------
H
K
I
A
P
A
I
A
T
G
N
V
I
V
---
H
H
-------
P
S
--------------------
S
K
A
P
L
V
C
I
E
L
A
K
-
I
I
E
N
A
L
K
K
Y
N
---
V
P
L
G
-----
V
Y
N
---
L
L
T
G
A
G
E
V
V
G
D
E
I
V
V
N
----
E
K
V
-
N
M
I
-
S
F
T
----
G
S
S
-------
K
V
G
E
L
I
T
K
K
AGF
K
K
I
A
L
-
E
L
G
G
V
N
-
P
N
I
V
L
K
D
A
D
L
N
K
A
V
-------------
N
A
L
I
K
-
G
S
F
I
Y
-----
A
G
Q
V
C
I
S
V
--------
G
M
----
I
L
V
D
-----
E
S
I
A
D
K
F
I
E
M
-------
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
75.78
23%
-42
- C5 -
3RHD
1
LADH_METJA
A:
[128-295]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
E
P
V
G
I
-
V
-
G
A
I
T
-
P
FNF
P
L
N
L
S
A
---------
H
K
I
A
P
A
I
A
T
G
N
V
I
V
---
H
H
-------
P
S
--------------------
S
K
A
P
L
V
C
I
E
L
A
K
-
I
I
E
N
A
L
K
K
Y
N
---
V
P
L
G
-----
V
Y
N
---
L
L
T
G
A
G
E
V
V
G
D
E
I
V
V
N
----
E
K
V
-
N
M
I
-
S
F
T
----
G
S
S
-------
K
V
G
E
L
I
T
K
K
AGF
K
K
I
A
L
-
E
L
G
G
V
N
-
P
N
I
V
L
K
D
A
D
L
N
K
A
V
-------------
N
A
L
I
K
-
G
S
F
I
Y
-----
A
G
Q
V
C
I
S
V
--------
G
M
----
I
L
V
D
-----
E
S
I
A
D
K
F
I
E
M
-------
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
Fugue
71.20
17%
-29
- C4 -
4QNU
3
CMOB_ECOK1
A:
[1-323]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIDF
G
N
F
Y
S
L
I
A
K
N
HLS
H
W
L
E
T
L
P
A
Q
I
A
N
W
Q
R
E
QQHGL
F
K
Q
W
S
N
A
-----------
V
E
F
L
P
E
-
I
-
K
P
Y
R
-
L
------
D
L
L
---------
H
S
V
T
A
E
S
E
E
P
L
S
A
G
-
Q
I
K
R
-------
I
E
--------------------
T
L
M
-------
R
N
-
L
M
-----
P
W
R
K
G
P
F
S
L
Y
-----
G
V
N
IDT
E
W
R
S
D
W
K
W
D
R
V
L
P
H
L
S
----
D
L
T
-
G
R
T
-
I
L
D
V
GCG
S
G
Y
-------
H
M
W
R
M
I
G
A
G------
A
H
-
L
A
V
G
I
D
-
P
T
Q
L
F
L
C
Q
F
E
A
V
R
K
L
L
GNDQR
A
H
L
L
PL
G
I
E
Q
L
-
P
A
L
K
A
------
F
D
T
V
F
S
M
--------
G
V
----
L
-
Y
H
RRS
P
L
E
H
L
W
Q
L
K
D
Q
L
-------
V
------
N
E
G
E
L
V
L
E
T
L
V
I
D
G
D
EN
T
V
L
V
P
G
DRYAQMRNVYFI
P
S
A
L
A
L
--
K
N
W
L
K
K
C
GFVDIRIA
D
V
S
V
---------------------
T
T
T
E
E
Q
R
R
T
E
W
M
V
T
---------
E
S
L
----
A
D
F
L
D
--
P
H
-
D
P
G
K
T
V
E
G
Y
P
A
P
K
R
A
V
L
I
A
R
K
P---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
Fugue
67.31
18%
-32
- C8 -
1ASH
2
GLB_ASCSU
A:
[1-147]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
N
-----------
K
T
R
E
L
C
-
M
-
K
S
L
E
H
A
------
K
V
D
---------
T
S
N
E
A
R
Q
D
G
I
D
L
Y
K
-
H
M
F
E
-------
N
Y
--------------------
P
P
L
-------
R
K
-
Y
F
-----
K
S
R
------------------
E
E
Y
T
A
E
D
V
Q
N
D
--------------
P
F
-
F
A
K
----
Q
G
Q
-------
K
I
L
L
A
C
H
V
-------
L
C
-
A
T
Y
D
-
D
-
R
E
T
F
N
A
Y
T
R
E
L
L
D
R
-------------
H
A
R
D
H
-
V
H
M
--------------------------------
P
-----
P
E
V
W
T
D
F
W
K
L
-------
F
------
E
----------------------------------
E
Y
L
G
K
K
--
T
T
L
D
-------------------------------------------------
E
---------
P
T
K
----
Q
A
W
H
E
-
I
G
R
-
E
F
A
K
E
I
N
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
Fugue
59.87
8%
-52
* C8 *
3P94
1
?
A:
[1-204]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
E
K
G
D
W
A
Q
F
G
R
Y
A
------
E
A
N
K
T
V
K
-----------
V
P
S
N
V
V
-
F
M
G
N
S
I
-
T
------
D
G
W
---------
W
P
A
D
S
T
F
F
I
R
N
N
F
V
-
D
R
G
I
-------
S
G
--------------------
Q
T
T
-------
S
E
M
L
V
-----
R
F
R
---
Q
D
V
I
-----
N
L
K
--------
P
K
A
V
V
I
L
A
G
I
N
----
D
I
A
-
H
N
N
-
G
V
I
----
A
L
E
-------
N
V
F
G
N
L
V
S
M
------
A
E
-
L
A
K
A
N
H
-
I
K
V
I
F
C
S
V
L
P
A
Y
D
F
-------------
P
W
R
P
G
M
Q
P
A
D
K
-----
V
I
Q
L
N
K
W
I
--------
K
E
----
Y
-
A
D
-----
K
N
G
L
T
Y
V
D
-----------------------------------------------------------------
Y
---------
H
S
A
M
--------------------
K
D
E
R
N
G
L
P
A
N
L
S
-
K
---------
D
G
V
HPT
L
E
G
Y
K
I
M
E
K
I
-
V
L
E
A
I
H
K
T
V
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
Fugue
59.05
14%
-52
* C7 *
3UGM
-
PTHX1_XANOP
A:
[169-1048]
KPKVRELVAHIVALSQHPAALGTVAVTYQHIITALAT
H
E
D
I
V
G
V
G
KQWSG
A
R
A
L
E
A
L
L
T
D
A
G
E
L
RGPPLQLDT
G
Q
L
V
K
I
A
K
R
GG
V
T
A
M
E
A
V
H
A
SRNALTPLNLT
P
A
Q
V
V
A
I
A
SNNG
G
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
A
HGLTPA
Q
V
V
A
I
A
SHDG
G
K
Q
A
L
E
T
M
Q
R
L
L
P
V
L
C
Q
A
HGLP
P
D
Q
V
V
A
I
A
SNIG
G
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
A
H
G
L
T
P
D
Q
V
V
A
------
I
A
S
H
G
G
G
-----------
K
Q
A
L
E
T
-
V
-
Q
R
L
L
-
P
------
V
L
C
---------
Q
A
H
G
L
T
P
D
Q
V
V
A
I
A
-
S
-
H
D
-------
G
G
--------------------
K
Q
A
-------
L
E
-
T
V
-----
Q
R
L
---
L
P
V
L
-----
C
Q
A
---
H
G
L
T
P
D
Q
V
V
A
I
A
S
N
G
G
--------
G
K
Q
-
A
L
E
----
T
V
Q
-------
R
L
L
P
V
L
C
Q
-------
A
H
----
G
L
T
-
P
D
Q
V
V
A
I
A
S
N
---
G
-------------
G
K
Q
A
L
-
E
T
V
Q
R
-----
L
L
P
V
L
C
Q
A
--------
H
G
----
L
-
T
P
-----
D
Q
V
V
A
I
A
S
H
D
-------
G
------
G
----------------------------------
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
---------
Q
T
H
G--------------------
L
T
P
A
Q
V
V
A
I
A
S
H
-
D
---------
G
G
K
----
Q
A
L
E
T
-
V
Q
Q
-
L
L
P
V
L
C
Q
A
H
G
L
T
P
D
Q
V
V
A
I
A
SNIG
G
K
Q
A
L
A
T
V
Q
R
LLPVLCQAHGLTPDQV
V
A
I
A
S
N
GGG
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
AHGLT
P
D
Q
V
V
A
I
A
SNGG
G
K
Q
A
L
E
T
V
Q
R
LLPVLCQAHGLTQVQVVAIASNIGGKQA
L
E
T
V
Q
R
L
LPVLCQA
H
G
L
T
P
A
Q
V
V
A
I
A
SHDG
G
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
AHGLT
P
D
Q
V
V
A
IASNGG
G
K
Q
A
L
E
T
V
Q
R
LLPGLT
Q
E
Q
V
V
A
I
A
SNNGG
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
AHGLT
P
D
Q
V
V
A
I
A
SNGG
G
K
Q
A
L
E
T
V
Q
R
LLPVLCQAHGLT
P
A
Q
V
V
A
I
A
SNIG
G
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
DHGLT
L
A
Q
V
V
A
I
A
SNIG
G
K
Q
A
L
E
T
V
Q
R
L
LPVLCQGLT
Q
D
Q
V
V
A
I
A
SNIG
G
K
Q
A
L
E
T
V
Q
R
LLPVLCQDHGLT
P
D
Q
V
V
A
I
A
S
NIGGKQ
A
L
E
T
V
Q
R
L
L
PVLCQDHGLT
L
D
Q
V
V
A
I
A
S
N
GGK
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
DHGLTPDQVVAIASNSG
2
PsiBlast_PDB
55.73
27%
-24
- C5 -
2V3B
1
RURE_PSEAE
A:
[133-203]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
D
Y
A
R
------
F
R
Q
A
A
A
G
-----------
K
R
R
V
L
L
-
L
-
G
A
G
L
-
I
------
G
C
E
F
A
N
D
L
S
S
G
G
Y
Q
L
D
V
V
A
P
C
E
Q
V
M
P
-
G
L
L
H
-------
P
A
----------------------
A
-------
A
K
-
A
V
-----
Q
A
G
---
L
E
G
L
-----
G
V
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
54.59
27%
-19
- C5 -
2V3A
4
RURE_PSEAE
A:
[133-203]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
D
Y
A
R
------
F
R
Q
A
A
A
G
-----------
K
R
R
V
L
L
-
L
-
G
A
G
L
-
I
------
G
C
E
F
A
N
D
L
S
S
G
G
Y
Q
L
D
V
V
A
P
C
E
Q
V
M
P
-
G
L
L
H
-------
P
A
----------------------
A
-------
A
K
-
A
V
-----
Q
A
G
---
L
E
G
L
-----
G
V
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
Fugue
45.29
11%
10
* C6 *
3IF8
-
ZWILC_HUMAN
A:
[-4-309]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S
M
W
E
R
L
N
C
A
A
E
D
F
Y
S
R
------
L
L
Q
K
F
N
E
E
KKGIRKDPFL
Y
E
A
D
V
Q
-
V
-
Q
L
I
S
-
K
------
G
Q
P
---------
N
P
L
K
N
I
L
N
E
N
D
I
V
F
-
I
V
E
K
VPG
P
L
A
L
P
V
--------------------
G
K
A
-------
R
Q
-
L
I
-----
G
L
Y
---
T
M
A
H
NPNMT
H
L
K
---
I
N
L
P
V
T
A
L
P
P
L
W
V
R
C
D
SSDP
E
G
T
-
C
W
L
-
G
A
E
----
L
I
T
TNNSIT
G
I
V
L
Y
V
V
S
C
-------
K
A
-
D
K
N
Y
S
V
-
N
L
E
N
L
K
N
L
H
K
K
R
H
H
-------------
L
S
T
V
T
-
S
K
G
F
A
-----
Q
Y
E
L
F
K
S
Q
--------
T
A
----
I
-
A
L
-----
D
I
S
W
S
P
V
D
E
I
-------
L
QIPPLS
S
----------------------------------
T
A
T
L
N
I
--
K
H
L
Y
R
E
L
---------
K
F
L
---------------------
L
V
L
A
D
G
L
R
T
G
V
T
-
E
---------
W
L
E
----
P
L
E
A
K
-
S
A
V
-
E
L
V
Q
E
F
L
N
D
L
N
K
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
HHSearch
43.71
18%
-67
- C5 -
3O0Y
1
?
A:
[504-596]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
-----
A
V
R
L
V
V
D
T
--------
G
L
H
DKR
W
-
T
R
-----
E
Q
A
I
S
Y
M
S
E
Q
T
GTA
E
S
D
V
------
V
----------------------------------
A
E
I
E
R
Y
--
M
A
W
P
G
Q
A
---------
L
G
Y
---------------------
K
L
G
M
L
K
I
L
S
L
R
E
-
Q
A
K
A
R
L
GDKF
D
L
A
----
E
F
H
D
V
-
V
L
L
-
N
G
A
V
P
M
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
Fugue
42.80
12%
38
- C7 -
4Y0C
2
CLP41_ARATH
A:
[3-168]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
L
P
T
A
-
N
K
------
K
P
K
W
S
W
R
-----------
A
I
K
S
F
A
M
G
-
E
L
E
A
-
R
------
K
L
K
---------
Y
P
----
N
T
G
T
E
A
L
L
M
G
I
L
I
E
------
G
T
--------------------
S
F
T
-------
S
K
-
F
L
-----
R
A
-------------------------------------------
N
K
I
M
L
Y
K
----
V
R
E
-------
E
T
V
K
L
L
G
K
-------
A
D
M
Y
F
F
S
P
E
-
H
P
P
L
T
E
D
A
Q
R
A
L
D
S
-------------
A
L
D
Q
N
-
L
K
A
G
G
IGEVM
P
A
H
I
L
L
G
I
--------
W
S
----
E
-
V
E
-----
S
P
G
H
K
I
L
A
T
L
------------------------------------------------------------------------------------------------------
G
F
T
-------------------------
D
E
-
K
S
K
-
E
L
E
S
F
A
S
E
S
G
F
L
D
E-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
HHSearch
34.41
13%
-81
- C5 -
2GSC
-
?
A:
[80-119]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
-
S
E
L
D
T
-----
Q
V
Q
I
A
A
R
L
--------
G
Y
----
S
-
R
S
-----
E
D
D
Q
S
V
R
R
Q
V
-------
D
------
L
----------------------------------
V
F
A
-
K
L
--
T
A
L
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
HHSearch
32.63
18%
-25
- C5 -
2XF7
-
?
A:
[23-44]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
L
R
V
A
V
N
A
--------
G
D
----
L
-
T
Q
-----
E
E
A
D
K
I
M
S
Y
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
31.18
31%
76
- C5 -
4IM7
1
?
A:
[65-105]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
T
E
H
F
--
S
D
W
G
Y
Y
E
---------
V
N
L
---------------------
I
G
G
E
Q
Q
I
A
D
L
Q
Q
-
Q
---------
D
N
L
----
Y
T
V
A
E
-
M
S
A
-
D
A
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
29.83
58%
254
- C2 -
2HES
-
CIAO1_YEAST
X:
[185-209]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
D
W
E
--
C
---------
V
A
V
---------------------
L
N
G
H
E
G
--
T
V
W
S
-
S
---------
D
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
HHSearch
29.35
13%
23
* C5 *
2ODM
-
Y995_STAAW
A:
[57-86]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
F
A
V
K
L
--------
G
L
----
V
-
D
R
-----
E
D
G
K
Q
I
M
L
R
L
-------
E
------
K
----------------------------------
E
L
S
K
L
H
--
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
HHSearch
28.32
22%
21
- C5 -
2JOB
-
?
A:
[79-101]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
D
-----
F
V
R
K
A
F
Q
K
--------
G
L
----
I
-
S
Q
-----
Q
E
A
N
Q
W
L
S
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
HHSearch
27.03
9%
25
- C5 -
2GBO
-
Y2458_ENTFA
A:
[44-82]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
D
T
-------------
Q
M
Y
G
F
-
S
R
Q
V
T
-----
Y
---
A
T
R
L
--------
G
I
----
L
-
T
N
-----
D
E
G
H
R
L
L
S
D
L
-------
E
------
R
----------------------------------
E
L
N
Q
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
26.18
32%
67
- C3 -
1UPS
1
?
A:
[265-300]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
-------
P
K
--------------------
E
W
A
-------
I
D
-
Y
M
-----
R
V
W
---
K
P
V
------------
D
G
Y
K
E
S
--
L
N
N
Y
L
I
R
N
----
R
Q
T
-
G
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------