@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0307: (2016-03-14 )
LTTKKAFTDEEYFKLSEAVYQDGTLNSKKINIELSDRTKSNWKVVSKLNDRATNTQAFAVIPEEKGKDGKIYYNHNNMIFVYRGTKESKDFGSDIINVFAGKNSRTSLDRKSKNPFQVSKEWTEEVLKEFNPKNPTSTGHSLGGALSHYNSILYDFNATTYAAPNIYQLLPEDKQKKVRDGFYNNSIIDFTHDDDMIGTFDQFSSPIVGSQYIAERNNVKVGVKGVFGAIPGHYNETFEGCFSSDGTMKLKVDVDSIIKHAQDIDNIIQSLQTNNDDLENLEEKLQIGSKKIQNQLEEEKRIGGVYSELTTWDIDDVLTELCTKYKNGVYCFYNPNEFEKYYEMNHQTRRLLKNFQIELVDAAQSFRETNTSLGEWISNNN

Atome Classification :

(20 SA) ---.......-----..10.---.......20....----.-.--..----------30.----..-.....40..------......50---------........60........70........80-----...--.--..--...90-----.--..--....--.100-.----.----..------------------....---110---.-----------........---120------.........----------130--....--...140.---.------...-..150-----..--------------.----------------....160.......--170........180-----------.-----...----....190--------........200.----......210.--------......220.---...-...230........240.....------------------..250-..-...---..-----..260....-------...270.......280......-.290...--....300-----.--......---.310--.-----.-......320........330......----.340.------------......350.-......360.......370.......380---------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---LTTKKAF-----TDEEY---FKLSEAVYQDGTL----N-S--KK----------INI----EL-SDRTKSNWK------VVSKLNDR---------ATNTQAFAVIPEEKGKDGKIYYNHNNMIF------VYR--G--TK--ESKDF-----G--SD--IINV--FA-G-K----N----SR------------------TSLD---R-----K-----------SKNPFQVS---K--------EWTEEVLKE----------FNP--KNPT--STGHSLG---G------ALS-HYNSI-----LY--------------D----------------FNATTYAAPNIYQL--LP-EDKQKKVRDG------------F-----YNN----SIIDFT---------HDDDMIGTFDQF----SSPIVGSQYI--------AERNNVKVGV---KGV-FGAIP-GHYNETFEGCFSSDGT------------------MKL---KV-DVD---SI-----IKHAQDIDN-------IIQSLQTNNDDLENLEEKLQIG-SKKIQNQ--LEEEKR------I--GGVYSE---LTT---W-----D-IDDVLTE-LCTKYKNGVYCFYNPNEF----EKYYE------------MNHQTRRLLK-NFQIELVDAAQSFRETNTSLGEWISNNN----------------------
47 Fugue 75.7521% 7 - C3 -4NM6 A:[7-451] --SCRCEGPFYTHLGAGPNV---AAIREIMEERFGQ----K-G--KA----------IRI----ER-VIYTGKEGKSSQGCPIAKWVVRR---------SSSEEKLLCLVRERAGHTCEAAVIVILIL------VWE--GIPLS--LADKL-----Y--SE--LTET--LR-K-Y----G----TL------------------T--N---R-----R-----------CAL-------------------NEERTCA----------CQG--LDPE--TCGASFSFGCS------WSM-YYNGC-----KFARSKIPRKFKLLGDD----------------PKEEEKLESHLQNLSTLM-APTYKKLAPD------------A-----YNN----QI-EYE---------HRAPECRLGLKE----GRPFSGVTACLDFCAHAHRDLHNMQNGS----TL-VCTLT-REDNREFGGKPEDEQL------------------HVLPLYKVSDVDEFGSV-----EAQEEKKRSG------AIQVLSSFRRKVRMLAEPVKTG-SDEVWSD--SEQSFLDPD---I--GGVAVA---PTH------------GSILIE-CAKRELHATTPLKNPNR-----------------------NHPTRISLV-FYQ------HKSMNEPKHGLALWEAKMAEK--------------------
25 HHSearch 64.2717% -6 - C6 -3O0D ? A:[19-253] -----------------EKY---ARLANIGYCVGPG----TKI--FK----------PFN----CGLQCAHFPNVE------LIEEFHDPRL-------IFDVSGYLAVDH----------ASKQIYL------VIR--G--TH--SLEDV-----I--TD--IRIM--QA-P-L----T----NFDLAANISSTATCDDCLVHNGFI---Q-----S-----------YNNTYNQI---G--------PKLDSVIEQ----------YPD--YQIA--VTGHSLG---G------AAA-LLFGI-----NL--------------KVNGHD-----------PLVVTLGQPIVGNA------GFANWVDKLFFGQENPDVSKVS-----KDR----KLYRIT---------HRGDIVPQVPFWD---GYQHCSGEVF--------IDWP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 HHSearch 60.8717% -18 - C6 -3G7N ? A:[13-213] ------------------RA---AKLSSAAYTGCI----------G------------------------KAFDVT------IVKRIYDL---------VTDTNGFVGYST----------EKKTIAV------IMR--G--ST--TIT-----------D--IDIA--LI-T-P----ELSGVTFPSDVKIM-----------RGVH---R-----P-----------WSAVHDTI---I--------TEVKALIAK----------YPD--YTLE--AVGHSLG---G------ALT-SIAHV-----AL--------------AQNFPDKS---------LVSNALNAFPIGN------QAWADFGTAQ-------------------AG----TFNRGN---------NVLDGVPNMYSSPLV-NFKHYGTEYY--------SSGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 60.4012% -8 * C6 *3NGM - ? A:[13-243] -----------------KFY---IQHGAAAYCNSEA----P-A--GA----------KVTCSGNGC-PTVQSNGAT------IVASFTGS---------KTGIGGYVATDP----------TRKEIVV------SFR--G--SI--NIRNW-----L--TN--LDFD--QD-D-C----S----LTSGCGVH------------SGFQ---N-----A-----------WNEISAAA---T--------AAVAKARKA----------NPS--FKVV--SVGHSLG---G------AVA-TLAGA-----NL--------------RIGGTP-----------LDIYTYGSPRVGNT------QLAAFVSNQ-------------------AG----GEFRVT---------NAKDPVPRLPPLIF--GYRHTSPEYW--------LSGS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 HHSearch 58.7714% -15 - C6 -1TIB - LIP_THELA A:[11-225] -----------------NLF---AQYSAAAYCGKNN----D-APAGT----------NITCTGNAC-PEVEKADAT------FLYSFEDSG--------VGDVTGFLALDN----------TNKLIVL------SFR--G--SR--SIENW-----I--GN--LNFD--LKEI-N----D----ICSGCRGH------------DGFT---S-----S-----------WRSVADTL---R--------QKVEDAVRE----------HPD--YRVV--FTGHSLG---G------ALA-TVAGA-----DLRGNGY---------D----------------IDVFSYGAPRVGNR------AFAEFLTVQ------------------TGG----TLYRIT---------HTNDIVPRLPPREF--GYSHSSPEYW--------IKSG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31 HHSearch 56.6216% -7 - C6 -1UWC FAEA_ASPNG A:[16-218] ------------------EM---ATISQAAYADLCN----I-P--S-----------TI--------I-KG-------------EKIYNA---------QTDINGWILRDD----------TSKEIIT------VFR--G--TG--SDTNL-----Q--LD--TNYT--LT-P-F----D----TLPQCNDCEVH---------GGYY---I-----G-----------WISVQDQV---E--------SLVKQQASQ----------YPD--YALT--VTGHSLG---A------SMA-ALTAA-----QL--------------SATYDN-----------VRLYTFGEPRSGNQ------AFASYMNDA------------FQVSSPETT----QYFRVT---------HSNDGIPNLPPAEQ--GYAHGGVEYW--------SVDP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
46 Fugue 56.3916% 23 - C6 -4K70 ? A:[2-483] -------PGS-----MEALV---RALEEADHAVATV----V-Q--SR----------ILE----FF-MAAGRETPA------GVRGLWAR---------ALRLACRAYVETGTCEAAVLAENLAGLALWRLRHDWDE--G--TA--PLLELLGVVNG--DD--TTAA--LT-E-A----G----LR------------------TSAE---F-----G-----------PDAMFRLV---S--------EWCAAFDEALAGARSADDVLAA--PRVV--PPEQTAR---A------LVQ-PRFAT-----LY--------------D----------------MDFVQDGLRYVAQH--TNWALPLALAVRQ------------M-----QNE----GLKPLT---------RALFALTIADEFFHDRQNPTLREQFA--------EAARAVDEAALVPVGE-VNATP-RTAVEVRVSAALAHGDAYVRELRPGTVARRLRTDQGV---LA-LLD---PGAQAVHVAAAADLDHTQVDATGVWEAVQASASPLQVVEALVTAGFTRRHCDL--LERAVLDRAPRLT--DAQRAV---GCT---A-----V-VGGVVHR-LLDDYGPGLDYVRAYTDVADTLEPLYGDVTAALGLPEKGVEHVVRHCMAPRPPTEHVGAARAALLREVAAAERRAGLAHSAAREALNTWLAFRAQSRWGL
26 HHSearch 56.3013% -8 - C6 -3UUE ? A:[21-227] -----------------SLA---AGLVQQTYCDSTE----N----------------G-----------LKIGDSE------LLYTMGEG---------YARQRVNIYHSP-----------SLGIAV------AIE--G--TNLFSLNSD-----L--HD--AKFW--QE-DPNERYIQ----YYPKGTKLM-----------HGFQ---Q-----A-----------YNDLMDDI---F--------TAVKKYKKE----------KNE--KRVT--VIGHSLG---A------AMG-LLCAM-----DI--------------ELRMDGGL---------YKTYLFGLPRLGN------PTFASFVDQK------------------IGD----KFHSII---------NGRDWVPTVPPRAL--GYQHPSDYVW--------IYPG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48 Fugue 55.7611% 13 - C6 -4QUV ? A:[23-427] FSWLVLMIAL-----PPLVY---YLWICVTYYQGELVFTSD-A--AA----------WRR----FW-SHVAPPTWH------AAGLYAAW---------FLGQAALQVWAPGPTVQGMKLPDGSRLDY------RMN--G--IF--SFLFT-----L--AV--VFGL--VTMG-W----L----DA------------------TVLY---D-----Q-----------LGPLLTVV---N--------IFTFVFAGF----------LYF--WGPF--Y-DYFMG---T------ALNPRIGSL-----DL--------------K----------------LFCEARPGMIFWLL--MN-LSMAAKQYEL------------H-----GTVTVPMLLVVGF---------QSFYLIDYFIHE----EAVLTTWDIK--------HE----KFGW---MLC-WGDLVWLPFTYTLQAQYLVHHT------------------HDLP--VW-GII---AI-----VALNLAGYA-------IFRGANIQKHHFRRDPNRIVWG-KPAKYIK--TKQGSL------LLTSGWWGIARHMNY---F-----G-DLMIALS-WCLPAAFG----SPIPYF----HIVYF------------TILLLHREKR-DDAMCLAKYGEDWLQYRKKVPWRIVPKIY---------------------
53 Fugue 48.6610% -6 - C2 -2V4J DSVB_DESVH B:[2-381] --------AF-----ISSGYNPEKPMANRITDIGPR----K-F--DE----------FFP----PV-IAKNFGSWL------YHEILEPG---------VLMHVA----------------ESGDKVY------TVRVGA--AR--LMSIT-----H--IR--EMCD--IA-D-K----Y----CG------------------GHLR---F-----T-----------TRNNVEFMVADE--------ASLKALKED----------LAS--RKFDGGSLKFPIG---GTGAGVSNIV-HTQGW-----VH--------------C----------------HTPATDASGPVKAI--MD-EVFEDFQSMR------------L-----PAP----VRISLACCINMCGAVHCSDIGVVGIHR----KPPMIDHEWT--------DQLCEIPLAV---ASCPTAAVR-PTKLEI-------GDK------------------KVN---TI-AIK---NER----CMYCGNCYT-------MCPALPISDGEGDGVV--IMVG-GKV-SNR--ISMPKF------S--KVVVAY---IPN---EPPRWPS-LTKTIKH-IIEVYSANAYKYERLGEW----AERIG------------WERFFSLTGL-EFSHHLIDDFRDPAYYTWRQSTQFKF------------------------
34 HHSearch 47.7017% -5 - C6 -2QUB ? A:[119-266] ----------------------------------------------------------------------------------------------------TTAQAEVLGKYDSEG------NLTAIGI------SFR--G--TS--GPRES-----L--IGDTIGDV--IN-D-L----L----AG------------------FGPK---G-----Y-----------ADGYTLKA---FGNLLGDVAKFAQAH--G----------LSG--EDVV--VSGHSLG---G------LAV-NSMAA-----QS--------------DANWGGFYAQ-------SNYVAFASPTQYE----------------------------------AGG----KVINIG---------YENDPVFRALDG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 HHSearch 45.3417% -13 - C6 -2ORY - ? A:[81-244] -------------------------------------------------------------------------------------------------------------------------AEGEYVI------AIR--G--TNPVSISDW-----L--FN--DFMVSAMK-K-W----P----YASVEGRILKISESTS----YGLKTLQKLKPKSH-----------IPGENKTI---L--------QFLNEKIGP----------EGK--AKIC--VTGHSKG---G------ALS-STLAL-----WLKDIQGVKLSQNI--D----------------ISTIPFAGPTAGNA------DFADYFDDC------------------LGD----QCTRIA---------NSLDIVPYAWNT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 HHSearch 44.5914% 21 - C6 -2YIJ - DSEL_ARATH A:[126-348] ---------------------------------------------------------------------------------------------------ESNWMGYVAVTDDQGTAL---LGRRDIVV------SWR--G--SV--QP---------------FEFG--LVNA-I----K----IFGERNDQVQIH--------QGWY---S-----IYMSQDERSPFTKTNARDQV---L--------REVGRLLEK----------YKDEEVSIT--ICGHSLG---A------ALA-TLSAT-----DI--------------VANGYNRPKSRPDKSCPVTAFVFASPRVGDS------DFRKLFSGL------------------EDI----RVLRTR---------NLPDVIPIYPPI----GYSEVGDEFP--------IDTRKSPYMK---SPG-N-LAT-FHCLEGYLHGV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 44.2831% -27 - C- -4L8O ? A:[21-90] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIEERLEAL-EKEIQKMKDIEEIKK------L--KGQYFR---CLDGKFW-----DELETTLSPNIVTSY---KLVFHGPKEV----TDYF--------------------------------------------------------------------------
35 HHSearch 43.7418% 6 - C6 -2Z8X ? A:[133-262] --------------------------------------------------------------------------------------------------------------------------LTEIGI------AFR--G--TS--GPREN-----LILDS--IGDV--INDL-L----A----AF-------------------GPK---D-----Y-----------AKNYVGEA---FGNLLNDVVAFAKAN--G----------LSG--KDVL--VSGHSLG---G------LAV-NSMAD-----LS--------------GGKWGGFFAD-------SNYIAYASPTQSS-----------------------------------TD----KVLNVG---------YENDPVFRALD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
52 Fugue 42.4713% 5 - C1 -2MAT MAP1_ECOLI A:[2-263] ---AISIKTP-----EDIEK---MRVAGRLAAEVLE----M-I--EPYVKPGVSTGELDR----IC-NDYIVNEQH------AVSACLGYHGYPKSVCISINE---VVCHGIPDD--AKLLKDGDIVN------IDV--T--VI--K-DGF-----H--GD--TSKM--FI-V-G---------K---------------------PT---I-----M-----------GERLCRIT---Q--------ESLYLALRM----------VKP--------------G---I------NLR-EIGAA-----IQ--------------K----------------FVEAE----------------------GF------------S-----V-------VREYC-----------GHGIGQ-GFH----EEPQVL-HYD--------SRETNVVLKP---GMT-FTIEP-MVNAGKKE-IRTMKD-------------------------------------------------------------------------------------------------------------G---WTV---K-----T-KDR--SL--SAQYEHTIVVTDNGCEI----LTLRK------------DDTIP--AII-SHD-----------------------------------------------
16 PsiBlast_PDB 41.0128% 28 - C6 -4FLF LIP_THELA A:[102-176] ----------------------------------------------------------------------------------------------------------------------------------------------------------------D--ICSG--CR-G-H----D----GF------------------TSSW---R-----S-----------VADTL------R--------QKVEDAVRE----------HPD--YRVV--FTGHSLG---G------ALA-TVAGADLRGNGY--------------D----------------IDVFSYGAPRV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 40.6328% 33 - C6 -1DT5 - LIP_THELA A:[102-176] ----------------------------------------------------------------------------------------------------------------------------------------------------------------D--ICSG--CR-G-H----D----GF------------------TSSW---R-----S-----------VADTL------R--------QKVEDAVRE----------HPD--YRVV--FTGHSLG---G------ALA-TVAGADLRGNGY--------------D----------------IDVFSYGAPRV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 40.6028% 24 - C6 -4GLB LIP_THELA A:[102-176] ----------------------------------------------------------------------------------------------------------------------------------------------------------------D--ICSG--CR-G-H----D----GF------------------TSSW---R-----S-----------VADTL------R--------QKVEDAVRE----------HPD--YRVV--FTGHSLG---G------ALA-TVAGADLRGNGY--------------D----------------IDVFSYGAPRV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 40.2028% 31 - C6 -1DTE - LIP_THELA A:[102-176] ----------------------------------------------------------------------------------------------------------------------------------------------------------------D--ICSG--CR-G-H----D----GF------------------TSSW---R-----S-----------VADTL------R--------QKVEDAVRE----------HPD--YRVV--FTGHSLG---G------ALA-TVAGADLRGNGY--------------D----------------IDVFSYGAPRV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------