@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Lmo0327: (2016-03-14 )
VILKKIFIALIALVVIINTVSFTSVSASTPTWLEQTMNNNEPFIKEIETETGKTRANITQTDLEAITALRVTGASDIPANIDMLTHLTLLKAVQGTISSVPNSVGNLKELKILNLNTNHLSNFPTIVYQLPKLEELQLNDGTIEEIPATITNMASHLKFLTVNNNRLVKVPTIIFSTNWSNSSTGELDLFTTGNQIVTDIPANYVSNFNNGQNMLEFYDGQFQKQDQLTTTPGYTIDVPVGTDFNQLTPDKTKLALTSGRTLLAQHEFEYYDDGSSSLIHNGVAAAPGQATIFIKSKFSTQSNKFARTQVTVNIAALNGGPITVKHEDTKGQELAPPVILNGKDGDPYTTTQKTFPGYTLVATPANQNGAFTLNPATVNYVYSANDYKLTSTFKDAQGQELKAPVVDTKDYHIQDNYTTTAATIPGYSLVSTPANQNGTFGAGNVTVNYVYKKDDYTLTSTYKDTNGQELKAPVVDATTYHYQDTYTTTAAVFPGYTLVATPTNATGTFGSSNITVHYVYQANGYQLTSTFKDQQGKTISPDDVDTKTYHVNDPYTTTAKTIPGYTLVTTPTNNQGNFGTSDITVDYVYKAEDYTLTSTYKDAQGKELKQPVVDSKKYHIQDNYSTSAATIPGYTLVATPANETGTFHTSDVTVNYVYKLTDLKLTSTYKDAQGTELKPPVVDSKTYHIQDNYATTAAVIPGYTLVATPANQSGTFGSTDIQVNYVYQAVAYKLTSTYKDQQGNDLALPKVDTKTYHIQDGYTTSDIAIPGYTLVAAPTNQTGTFGASDVTVNYVYKANDYTLTSTYKDAQGKELKTPVIDSQKYHINDTYTTTGATIPGYTLVAAPANQSGTFGAANVTVNYVYKADDYTLTSTYKDANGKELKAPVVDSKTYHTKDNYSTSAATIPGYTLVAAPANQTGTFNTSNVTVNYFYKANEYTLTSTFKNVQGTELKPAIVKKGFIIKDGYSTSGVTIPGYTLVATPSNKKGTFGASNVTVNYVYKANGYALITTYKDTQGKDLKPLAIDTKTYNINDPYTATALNIPGYTLTTTPANEKGVFGASDETVNYVYKANDYTLTTTYKDANGKELQAPKVDAKTYHIQDTYKTTAAVIPGYTLVAIPKNDQGTFGANNVTVNYVYQTNDYTLTATFKDAQGNELKATEVDAQKYHIHDTYTSKAAVIPGYTLEKTPTNETGTFNASDIQVNYVYKANDYQLTSTFKDQQGNEIALPTVDAKTYHIHEAYTTKARLIPGYSLVAAPKNQIGAFGTSDVTVNYVYKKDAIIKPITPAKPTILTIKTPASKVIKTKVVKQTLPKTGDDDAGLLNLLRLIGLVLILGVFLAVGSKKLR
Atome Classification :
(20 SA)
.........10........20........30........40........50......--..60........70-..--..-....-80-----------------.........90........100-.-..-..-...110.......120...-.-...-.130......--.140.......150.......160...---------...-.170.-----......180...-----....190-....-...200--------......----------.210.......220.......230.......240.......250.......260.......270..--.....280.......290.......300.......310.......320.......330.......340.......350.......360.......-370.......380.......390.......400......---.410.......420.......430.......440.......450-----.........460.......470.......480.......490.......500....--...510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.-----......760.......770.......780.......790.......800.......--810.......820.--......830.......840.......850.....---..860.......870-----........880.......890.......900.......910....-...920.......930.........----940.......950.......960.......970.......980.......990.......1000......1010......1020--........1030......1040......1050......1060......1070......1080......1090......1100......1110......1120......1130......1140......1150.....-------.1160......1170......1180......1190......1200......1210......1220......1230......1240......1250......1260......1270......1280......1290......1300......1310......1320......1330......1340......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
V
I
L
K
K
I
F
I
A
L
I
A
L
V
V
I
I
NT
V
S
F
TSVSAST
P
T
W
L
E
Q
TMNNNE
P
F
I
K
E
I
ETETGKTRAN--I
T
Q
T
D
L
E
A
I
T
A
L
R
V-TG--AS-DIP
A
-
N
------------------
I
D
M
L
T
H
L
T
L
L
K
A
V
Q
G
T
I
S
SV-P-N-SV-GN-L
K
E
L
K
I
L
NLNTNHLS-NF
P
-
T
-
I
V
Y
-QLPK
L
E
E
L
QL--NDG
T
I
E
E
I
P
A
T
I
T
N
M
A
SH
L
K
F
L
T
VNN
N
---------
R
L
V
-
K
V
P
T
I
-----
I
F
STNWSNSSTG-----
E
L
D
L
F
TT-GN
Q
I
-
V
TDI
P
A
--------
N
Y
V
SNF----------NN
G
Q
N
M
L
E
F
YDGQFQKQDQLTTTPG
Y
T
I
DVPVGTDFNQLTPDK
T
K
L
A
LTSG
R
T
L
L
AQH
E
F
E
Y
YDDG--
S
S
S
L
I
HNGVAAAPG
Q
A
T
I
F
I
K
S
KFSTQSN
K
F
A
R
T
Q
V
T
V
N
I
A
ALNG
G
P
I
T
V
K
HEDTKGQELAP
P
V
I
L
NGKDGDPYTTTQKTFP
G
Y
T
L
V
ATPANQNG-
A
F
T
LNP
A
T
V
N
Y
V
Y
SAN
D
Y
K
L
T
S
TFKDAQGQELKAPVVDT---K
D
Y
H
I
QDNY
T
T
T
A
A
TIPG
Y
S
L
VSTPANQNGTFGA
G
N
V
T
V
N
Y
V
-------
Y
KKD
D
Y
T
L
T
S
T
YKDTNGQELKAPVVD
A
T
T
Y
H
Y
QDTY
T
T
T
A
A
VFP
G
Y
T
L
V
ATPTNAT--GTFGSS
N
I
T
V
H
Y
V
Y
QAN
G
Y
Q
L
T
S
T
FKDQQGKTISPDDVDT
K
T
Y
HVNDPYTTTAKTIP
G
Y
T
L
V
TTPTNNQGNFGT
S
D
I
T
V
D
Y
V
Y
KAE
D
Y
T
L
T
S
TYKDAQG
K
E
LKQPVVDS
K
K
Y
H
I
QDNYSTSAATIP
G
Y
T
L
V
ATPANETG
T
F
H
TS
D
V
T
V
N
Y
V
Y
K
L
T
D
L
K
L
T
S
T
YKDAQGTELKPPVVDS
K
T
Y
H
I
QDNYA
T
T
A
A
VIPG
Y
T
L
V
ATPANQSGTFGS
T
D
I
Q
V
N
Y
V
Y
Q
A
V
A
Y
K
L
T
S
TYKDQQGNDLALPKVDT-----
K
T
Y
H
I
QDGYTTS
D
I
AIP
G
Y
T
L
V
AAPTNQTGTFGAS
D
V
T
V
N
Y
V
Y
KAN
D
Y
T
L
T
S
TYKD--AQGKELKTPVIDSQ--
K
Y
H
INDTYTTTGATIP
G
Y
T
L
V
AAPANQSGTF
G
A
A
---
N
V
T
V
N
Y
V
Y
KAD
D
Y
T
------
L
T
S
T
YKDANGKELKAPVVDSK
T
Y
HTKDNYSTSAATIP
G
Y
T
L
V
AAP-ANQTGTFNT
S
N
V
T
V
--
N
Y
F
Y
KAN
E
Y
----
T
L
T
S
T
FKNVQGTEL
K
P
A
I
VKK
G
F
I
I
KDGYSTS
G
V
T
IP
G
Y
T
L
V
ATPSNKKGTFGAS
N
V
T
V
N
Y
V
Y
KAN
G
Y
A
L
I
T
T
YKDTQGKDL----K
P
L
A
I
D
T
K
T
YNINDPY
T
A
T
A
LNIP
G
Y
T
L
TTTPANEKGVFGASDE
T
V
N
Y
V
Y
KAN
D
Y
T
L
T
T
T
YKDANGKELQAPKVD
A
K
T
Y
H
I
Q
DTYKT
T
A
A
VIPG
Y
T
L
V
A
IPKNDQGTFGAN
N
V
T
V
N
Y
V
Y
QTN
D
Y
T
L
T
A
T
F
KDAQGNE-------L
K
A
T
EVDA
Q
K
Y
H
I
H
DTYTSK
A
A
VIPGYTLEKTPTNETGTFNA
S
D
I
Q
V
N
Y
V
Y
KAN
D
Y
Q
L
T
S
TFKDQQG
N
E
I
A
L
P
TVDA
K
T
Y
H
I
H
EAYTTK
A
R
LIPG
Y
S
L
V
AAPKNQIGAFGTS
D
V
T
V
N
Y
V
Y
KKD
A
I
IKPITPAK
P
T
I
L
T
I
KTP
A
S
K
V
I
K
T
K
V
V
K
Q
TLPKTGDD
D
A
G
L
L
N
L
L
R
L
I
G
L
V
L
I
L
G
V
F
L
A
VGSKKLR
81
Fugue
68.80
21%
2
- C2 -
4MR0
7
PFBA_STRR6
A:
[114-571]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
A
L
S
V
K
D
Y
G
A
V
G
D
G
I
H
D
D
R
Q
A
I
Q
D
A
I
D
A
A
A
Q
GLGGG
N
V
Y
F
P
E
G
T
Y
L
V
K
E
I
V
F
L
K
-
S
H
T
H
L
E
L
N
E
K
A
T
I
L
N
G
---
I
N
I
K
N
H
P
S
I
V
F
M
T
G
L
F
T
D
DG
A
Q
V
E
W
G
P
T
E
D
I
S
Y
S
G
G
T
I
D
M
N
G
A
L
N
E
E
G
T
K
A
K
N
L
P
L
I
----
N
S
S
G
A
F
A
I
G
NSN
N
V
T
I
K
N
V
T
F
K
D
S
Y
Q
GHA
I
Q
I
A
G
S
K
N
V
L
V
D
N
S
R
F
L
G
Q
A
L
-
P
K
T
M
K
D
G
Q
I
I
S
K
E
S
I
Q
I
E
P
L
T
R
K
G
F
P
Y
A
L
N
D
D
G
K
K
S
E
N
V
T
I
QN
S
Y
F
G
K
S
D
K
S
GELV
T
A
I
G
T
H
Y
Q
T
L
S
T
Q
-
N
P
S
N
I
K
I
L
N
N
H
F
D
N
M
M
Y
A
G
V
R
F
T
G
F
T
D
V
L
I
K
G
N
---
R
F
D
K
K
V
K
G
E
S
V
H
Y
R
E
S
G
A
A
L
V
N
A
Y
S
Y
K
N
T
K
D
L
LDLN
K
Q
V
V
I
A
E
N
I
F
N
I
A
D
P
-
K
T
K
A
I
R
V
A
K
------------------
D
S
A
E
Y
L
G
K
V
S
D
I
T
V
T
K
N
V
I
N
N
N
S
K
E
T
E
Q
P
N
I
E
L
L
--
R
V
S
D
N
L
V
V
S
E
N
S
I
F
G
G
K
E
G
I
V
I
E
D
S
K
G
K
I
T
V
L
N
---
N
Q
F
Y
N
L
S
G
K
Y
I
S
F
I
K
S
N
A
N
G
K
E
P
VISD
G
N
F
N
I
V
T
E
N
G
L
Y
K
I
V
T
N
N
L
S
D
K
N
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
78
Fugue
68.30
18%
-9
- C4 -
1H6T
-
INLB_LISMO
A:
[31-321]
-------------------
G
P
L
G
S
E
T
I
T
V
P
T
P
I
K
Q
I
F
S
D
-
D
A
F
A
E
T
I
K
D
N
L
K
K
K
S
V
T
D
A
V
T
Q
N
E
L
N
S
I
D
Q
I
I
A
-
N
N
--
S
D
I
K
S
V
Q
-
G
------------------
I
Q
Y
L
P
N
V
T
K
L
F
L
N
G
N
K
L
T
D
I
---
K
-
P
L
-
A
N
-
L
K
N
L
G
W
L
F
L
D
E
N
K
V
K
-
D
L
S
-
S
-
L
-
K
-
D
L
K
K
L
K
S
L
S
L
--
E
H
N
G
I
S
D
I
N
G
L
V
H
--
L
P
Q
L
E
S
L
Y
L
G
N
N
KITDITVLS
R
L
T
-
K
L
D
T
L
-----
S
L
E
D
N
Q
I
S
D
I
V
P
LAGLT
K
L
Q
N
L
Y
L
-
S
K
N
H
-
I
S
D
L
R
A
LAGLKNLD
V
L
E
L
F
S
----------
Q
E
C
L
N
K
P
I
N
H
Q
S
N
L
V
V
P
N
T
V
K
N
T
D
G
S
L
V
T
P
E
I
I
S
D
D
G
D
Y
E
K
P
N
V
K
W
H
L
P
E
F
T
N
E
V
S
F
I
F
Y
Q
P
V
T
I
G
--
K
A
K
A
R
F
H
G
R
V
T
Q
P
L
K
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
65.01
30%
-16
- C5 -
2O6S
-
?
A:
[26-167]
-----------------------------------------------------
S
R
C
S
--
C
S
G
T
T
V
E
C
Y
S
Q
G
R
T
-
S
V
--
P
T
-
G
I
P
A
-
Q
TT
Y
L
D
LETNSLKSLPNGV
F
D
E
L
T
S
L
T
Q
L
Y
L
G
G
N
K
L
Q
S
L
-
P
-
N
-
G
V
-
F
N
K
L
T
S
L
T
Y
L
N
L
S
T
N
Q
L
Q
-
S
L
P
-
N
-
G
V
F
D
K
L
T
Q
L
K
E
L
A
L
--
N
T
N
Q
L
Q
S
L
P
D
G
V
F
D
K
L
T
Q
L
K
D
L
R
L
Y
Q
N
---------
Q
L
K
-
S
V
P
D
G
-----
V
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
63.46
30%
-29
- C5 -
3M18
1
?
A:
[79-226]
---------------------------------------------------------------------------------------------------------
F
D
D
L
T
E
L
G
T
L
G
L
A
N
N
Q
L
A
S
L
-
P
-
L
-
G
V
F
D
H
-
L
T
Q
L
D
K
L
Y
L
G
G
N
Q
L
K
-
S
L
P
-
S
-
G
V
F
D
R
L
T
K
L
K
E
L
R
L
--
N
T
N
Q
L
Q
S
I
P
A
G
A
F
D
K
L
T
N
L
Q
T
L
S
L
S
T
N
---------
Q
L
Q
-
S
V
P
H
G
-----
A
F
------
D
R
L
G
-----
K
L
Q
T
I
T
L
F
G
N
Q
F
D
C
S
R
C
E
T
--------
L
Y
L
S
Q
W
I
R
E
N
SNKVKD
G
T
G
Q
N
L
H
E
S
P
D
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
68
HHSearch
62.54
22%
-32
- C5 -
3E6J
4
?
A:
[40-172]
-------------------------------------------------------------------------------------------------------------
T
N
A
Q
I
L
Y
L
H
D
N
Q
I
T
K
L
-
E
-
P
G
V
F
-
D
S
-
L
I
N
L
K
E
L
Y
L
G
S
N
Q
L
G
-
A
L
P
V
G
-
V
F
D
-
S
L
T
Q
L
T
V
L
D
L
--
G
T
N
Q
L
T
V
L
P
S
A
V
F
D
R
L
V
H
L
K
E
L
F
M
C
C
N
---------
K
L
T
-
E
L
P
R
G
-----
I
E
R
L
T
------
H
-----
L
T
H
L
A
L
D
-
Q
N
Q
L
--
K
S
I
P
H
--------
G
A
F
D
R
L
----------
S
-
S
L
T
H
A
Y
L
F
G
N
P
W
D
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
74
Fugue
62.44
12%
-21
- C4 -
1M9S
8
INLB_LISMO
A:
[3-596]
-------------------------
E
T
I
T
V
S
T
P
I
K
Q
I
F
P
D
D
A
F
A
E
T
I
K
D
N
L
K
K
K
S
V
T
D
A
V
T
Q
N
E
L
N
S
I
D
Q
I
I
A
-
N
N
--
S
D
I
K
S
V
Q
-
G
------------------
I
Q
Y
L
P
N
V
T
K
L
F
L
N
G
N
K
L
T
D
I
---
K
-
P
L
-
T
N
-
L
K
N
L
G
W
L
F
L
D
E
N
K
I
K
-
D
L
S
-
S
-
L
-
K
-
D
L
K
K
L
K
S
L
S
L
--
E
H
N
G
I
S
D
I
N
G
L
V
H
--
L
P
Q
L
E
S
L
Y
L
G
N
N
---------
K
I
T
-
D
I
T
V
L
SRLTK
L
D
T
L
S
L
E
D
N
Q
I
S
-----
D
I
V
P
L
A
G
-
L
T
K
L
Q
N
L
Y
L
S
K
--------
N
H
I
S
D
L
----------
R
A
L
A
G
L
K
N
L
D
V
L
E
L
F
S
Q
E
C
L
N
K
P
I
N
H
Q
S
N
L
V
V
P
N
T
V
K
N
T
D
G
S
L
V
T
P
E
I
I
S
D
D
G
D
Y
E
K
P
N
V
K
W
H
L
P
E
FT
N
E
V
S
F
I
F
Y
Q
P
V
T
I
G
K
A
K
A
R
F
H
G
R
V
T
Q
P
L
E
T
T
E
K
T
V
N
L
T
R
Y
V
K
Y
I
R
G
N
A
G
I
Y
K
L
P
R
E
D
N
S
L
K
Q
G
T
L
A
S
H
R
C
K
A
L
T
V
D
R
E
A
R
N
G
G
K
L
W
Y
R
L
K
N
I
G
W
T
K
A
E
N
L
S
L
D
R
Y
D
K
M
E
Y
D
K
G
V
T
A
Y
A
R
V
R
N
A
S
G
N
S
V
W
T
K
P
Y
N
T
AGA
K
H
V
N
K
L
S
V
Y
Q
G
K
N
M
R
I
L
--
R
E
A
K
T
P
I
T
T
W
Y
Q
F
S
I
G
G
K
V
I
G
W
V
DTRALNT
F
Y
K
Q
S
M
E
K
P
T
R
L
T
R
Y
V
S
A
N
K
A
G
E
S
Y
Y
K
V
P
V
A
D
N
P
V
K
R
G
T
L
A
K
Y
K
N
Q
K
L
I
V
D
C
Q
A
T
I
EG
Q
L
W
Y
R
I
R
T
S
S
T
F
I
G
W
T
K
A
A
N
L
R
A
Q
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
61
HHSearch
62.22
23%
-50
- C5 -
2O6Q
-
?
A:
[82-240]
----------------------------------------------------------------
L
T
K
L
R
L
L
Y
L
-
N
D
NK
L
Q
-
T
L
P
A
G
I
------------------
F
K
E
L
K
N
L
E
T
L
W
V
T
D
N
K
L
Q
A
L
-
P
-
I
G
V
F
-
D
Q
-
L
V
N
L
A
E
L
R
L
D
R
N
Q
L
K
-
S
L
P
P
R
-
V
F
D
-
S
L
T
K
L
T
Y
L
S
L
--
G
Y
N
E
L
Q
S
L
P
K
G
V
F
D
K
L
T
S
L
K
E
L
R
L
Y
N
N
---------
Q
L
K
-
R
V
P
E
G
-----
A
F
D
K
-
L
T
----
E
-----
L
K
T
L
K
L
D
-
N
N
Q
L
--
K
R
V
P
E
--------
G
A
F
D
S
L
----------
E
-
K
L
K
M
L
Q
L
Q
E
N
P
W
D
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
58
HHSearch
61.90
23%
-40
* C5 *
2O6Q
-
?
A:
[78-216]
--------------------------------------------------------------------------------------
A
------------------
F
H
R
L
T
K
L
R
L
L
Y
L
N
D
N
K
L
Q
T
L
-
P
-
A
G
I
F
-
K
E
-
L
K
N
L
E
T
L
W
V
T
D
N
K
L
Q
-
A
L
P
I
G
-
V
F
D
-
Q
L
V
N
L
A
E
L
R
L
--
D
R
N
Q
L
K
S
L
P
P
R
V
F
D
S
L
T
K
L
T
Y
L
S
L
G
Y
N
---------
E
L
Q
-
S
L
P
K
G
-----
V
F
D
K
-
L
T
----
S
-----
L
K
E
L
R
L
Y
-
N
N
Q
L
--
K
R
V
P
E
--------
G
A
F
D
K
L
----------
T
-
E
L
K
T
L
K
L
D
N
N
Q
L
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
61.30
29%
-20
- C5 -
4U08
2
?
A:
[81-177]
----------------------------------------------------------------------------------
L
P
E
-
E
------------------
I
G
Q
L
Q
N
L
Q
K
L
K
L
Y
E
N
Q
L
T
A
I
-
P
-
K
-
E
I
-
G
Q
-
L
Q
N
L
Q
E
L
N
L
A
H
N
Q
L
A
-
T
L
P
-
E
-
D
I
E
-
Q
L
Q
R
L
Q
T
L
Y
L
--
G
H
N
Q
F
N
S
I
L
K
E
I
G
Q
L
-
Q
N
L
E
S
L
G
L
D
H
N
---------
Q
L
N
-
V
L
P
K
E
-----
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
PsiBlast_CBE
60.66
33%
-20
- C5 -
4U09
10
?
B:
[265-357]
------------------------------------------------------------------------------------------------------------------------------
P
-
K
-
E
V
-
G
Q
-
L
K
S
L
K
Y
L
S
L
Y
H
N
Q
I
T
-
T
L
P
-
V
-
E
V
T
-
Q
L
P
D
L
Q
E
L
H
L
--
S
G
N
K
I
T
I
L
P
K
E
I
L
Q
L
-
K
N
L
E
W
L
S
L
S
N
N
---------
K
L
N
-
A
L
P
K
E
-----
I
-------
G
Q
L
K
-----
K
L
Q
R
L
E
L
-
G
N
N
Q
-
L
T
T
L
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
60.53
33%
-15
- C5 -
4TZH
9
?
B:
[33-129]
----------------------------------------------------------------------------------
L
P
K
-
E
------------------
I
E
Q
L
V
N
L
E
S
L
H
L
R
D
N
E
L
T
T
L
-
P
-
E
-
E
I
-
G
I
-
L
K
N
L
K
Y
L
D
I
S
R
N
Q
I
S
-
N
F
P
-
K
-
E
I
Q
-
K
L
K
N
L
E
V
L
F
L
--
N
G
N
S
L
S
N
L
P
E
E
I
G
E
L
-
E
K
L
G
I
L
Y
L
N
N
N
---------
Q
L
T
-
T
L
P
K
E
-----
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
60.49
33%
-18
- C5 -
4TZH
5
?
A:
[33-129]
----------------------------------------------------------------------------------
L
P
K
-
E
------------------
I
E
Q
L
V
N
L
E
S
L
H
L
R
D
N
E
L
T
T
L
-
P
-
E
-
E
I
-
G
I
-
L
K
N
L
K
Y
L
D
I
S
R
N
Q
I
S
-
N
F
P
-
K
-
E
I
Q
-
K
L
K
N
L
E
V
L
F
L
--
N
G
N
S
L
S
N
L
P
E
E
I
G
E
L
-
E
K
L
G
I
L
Y
L
N
N
N
---------
Q
L
T
-
T
L
P
K
E
-----
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
76
Fugue
59.56
15%
-12
* C4 *
1D0B
2
INLB_LISMO
A:
[1-207]
---------------------------------------------
E
T
I
T
V
S
T
P
I
K
Q
I
--
F
P
D
D
A
F
A
E
T
I
K
D
N
L
K
K
K
--
S
V
-
T
D
A
V
-
T
------------------
Q
N
E
L
N
S
I
D
Q
I
I
A
N
N
S
D
I
K
S
V
-
Q
-
G
-
I
Q
-
Y
L
-
P
-
N
V
T
K
L
F
L
N
G
N
K
L
T
-
D
I
K
-
P
-
L
-
T
-
N
L
K
N
L
G
W
L
F
L
--
D
E
N
K
I
K
D
L
-
S
S
L
K
-
D
L
K
K
L
K
S
L
S
L
E
H
N
---------
G
I
S
----
D
I
-----
N
G
L
V
H
L
P
Q
----------
L
E
S
L
Y
L
-
G
N
N
K
-
I
T
-------------
D
I
T
V
L
----------
S
R
L
T
K
L
D
T
L
S
L
E
D
N
Q
I
S
D
--------
I
V
P
L
A
G
L
T
K
L
Q
N
L
Y
L
S
K
N
H
I
S
D
L
R
A
L
A
G
L
K
N
L
D
V
L
E
L
F
S
Q
--
E
C
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
PsiBlast_CBE
58.72
35%
28
- C5 -
3RGX
2
BRI1_ARATH
A:
[434-518]
----------------------------------------------------------------------------------------------------------------------------
I
-
P
-
S
-
S
L
-
G
S
-
L
S
K
L
R
D
L
K
L
W
L
N
M
L
E
G
E
I
P
-
Q
-
E
L
M
-
Y
V
K
T
L
E
T
L
I
L
DF
N
D
L
T
-
G
E
I
P
S
G
L
S
N
-
C
T
N
L
N
W
I
S
L
S
N
N
---------
R
L
T
G
E
I
P
K
W
-----
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
58.62
33%
-14
- C5 -
4U09
7
?
A:
[265-357]
------------------------------------------------------------------------------------------------------------------------------
P
-
K
-
E
V
-
G
Q
-
L
K
S
L
K
Y
L
S
L
Y
H
N
Q
I
T
-
T
L
P
-
V
-
E
V
T
-
Q
L
P
D
L
Q
E
L
H
L
--
S
G
N
K
I
T
I
L
P
K
E
I
L
Q
L
-
K
N
L
E
W
L
S
L
S
N
N
---------
K
L
N
-
A
L
P
K
E
-----
I
-------
G
Q
L
K
-----
K
L
Q
R
L
E
L
-
G
N
N
Q
-
L
T
T
L
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45
PsiBlast_CBE
58.17
35%
21
- C5 -
3RJ0
1
BRI1_ARATH
A:
[431-509]
----------------------------------------------------------------------------------------------------------------------------
I
-
P
-
S
-
S
L
-
G
S
-
L
S
K
L
R
D
L
K
L
W
L
N
M
L
E
G
E
I
P
-
Q
-
E
L
M
-
Y
V
K
T
L
E
T
L
I
L
DF
N
D
L
T
-
G
E
I
P
S
G
L
S
N
-
C
T
N
L
N
W
I
S
L
S
N
N
---------
R
L
T
G
E
I
P
K
W
-----
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
46
PsiBlast_CBE
57.95
35%
23
- C5 -
3RIZ
1
BRI1_ARATH
A:
[431-510]
----------------------------------------------------------------------------------------------------------------------------
I
-
P
-
S
-
S
L
-
G
S
-
L
S
K
L
R
D
L
K
L
W
L
N
M
L
E
G
E
I
P
-
Q
-
E
L
M
-
Y
V
K
T
L
E
T
L
I
L
DF
N
D
L
T
-
G
E
I
P
S
G
L
S
N
-
C
T
N
L
N
W
I
S
L
S
N
N
---------
R
L
T
G
E
I
P
K
W
-----
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57
HHSearch
57.80
25%
-37
- C5 -
2ID5
2
LIGO1_HUMAN
A:
[50-196]
------------------------------------------------------------------------------------
D
-
E
------------------
F
A
S
F
P
H
L
E
E
L
E
L
N
E
N
I
V
S
A
V
E
P
-
G
-
A
F
-
N
N
-
L
F
N
L
R
T
L
G
L
R
S
N
R
L
K
-
L
I
P
L
G
-
V
F
T
-
G
L
S
N
L
T
K
L
D
I
--
S
E
N
K
I
V
I
L
L
D
Y
M
F
Q
D
L
Y
N
L
K
S
L
E
V
G
D
N
---------
D
L
V
-
Y
I
S
H
R
-----
A
F
S
G
-
L
N
----
S
-----
L
E
Q
L
T
L
E
-
K
C
N
L
--
T
S
I
P
T
--------
E
A
L
S
H
L
----------
H
-
G
L
I
V
L
R
L
R
H
L
N
I
N
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
65
HHSearch
57.63
26%
-26
- C5 -
3E6J
4
?
A:
[58-175]
------------------------------------------------------------------------------------
G
-
V
------------------
F
D
S
L
I
N
L
K
E
L
Y
L
G
S
N
Q
L
G
A
L
-
P
V
G
-
V
F
-
D
S
-
L
T
Q
L
T
V
L
D
L
G
T
N
Q
L
T
-
V
L
P
-
S
A
V
F
D
-
R
L
V
H
L
K
E
L
F
M
--
C
C
N
K
L
T
E
L
P
R
G
I
E
R
L
-
T
H
L
T
H
L
A
L
D
Q
N
---------
Q
L
K
-
S
I
P
H
G
-----
A
F
D
R
-
L
S
----
S
-----
L
T
H
A
Y
L
F
-
G
N
P
W
-
D
C
E
C
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43
PsiBlast_CBE
57.03
35%
27
- C5 -
3RGZ
2
BRI1_ARATH
A:
[434-510]
----------------------------------------------------------------------------------------------------------------------------
I
-
P
-
S
-
S
L
-
G
S
-
L
S
K
L
R
D
L
K
L
W
L
N
M
L
E
G
E
I
P
-
Q
-
E
L
M
-
Y
V
K
T
L
E
T
L
I
L
D
F
N
D
L
T
-
G
E
I
P
S
G
L
S
N
-
C
T
N
L
N
W
I
S
L
S
N
N
---------
R
L
T
G
E
I
P
K
W
-----
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------