@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0339: (2016-03-14 )
MVSRKQSIQKTQLSKTKKQTLNVTIDRPIGYTDKFGNVYPLNYGFVEGVIGGDGEEQDVYVLSRKISEPIDTFQGDLIAVITRNDDVEDKWVVAAPNENFTIEEIREKVHFIEQYFDSEIKLI

Atome Classification :

(20 SA) .........10........20........30--------------.....---...---.40........50........60........---70........80.....--.-.-.90......--.----------.----------100--------------.-----------.......-------------.--110.......120.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MVSRKQSIQKTQLSKTKKQTLNVTIDRPIG---------------YTDKF---GNV---YPLNYGFVEGVIGGDGEEQDVYVLSRKISEP---IDTFQGDLIAVITRNDD--V-E-DKWVVAAPN--E----------N----------F----------------T-----------IEEIREK-------------V--HFIEQYFDSEIKLI
2 PsiBlast_PDB 84.4528% -83 - C7 -3D53 IPYR_RICPR A:[41-146] ---------------------------------------------FVDRF---MQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVP---GSVIKCRAIGVLMMEDE--S-GLDEKIIAVPT--SKL--------D----------I----------------T-----------FDHIKELDDLCEMLKKRI--V--HFFEHYKDLE----
17 PsiBlast_PDB 84.4328% -85 - C7 -3SW5 ? A:[31-150] ------------------QPIKYEMDKKSGAL-------------FVDRFLYTSMV---YPGNYGFVPHTLSEDGDPIDVLICNTRPLLPGCVINVYP--IGALIMEDDG--G-K-DEKIIAIPT--P----------K----------L----------------TQRYNNIHDYTDLPEITLK-------------QIEHFFEHYKDLE----
16 PsiBlast_PDB 83.6425% -55 - C7 -3FQ3 ? A:[22-167] -----MNIDAISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMT---YPGNYGFVPHTLSEDGDPIDVLVCNTRPLIP---GCVINVRPIGVLVMEDN--SGK-DEKIIAVPS--P----------H----------L----------------TRRYEKIHDYTDMPEITLKQI-----------A--HFFEHYKDLE----
3 PsiBlast_PDB 82.4128% -73 - C7 -3EMJ - IPYR_RICPR A:[41-146] ---------------------------------------------FVDRF---MQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVP---GSVIKCRAIGVLMMEDE--S-GLDEKIIAVPT--SKL--------D----------I----------------T-----------FDHIKELDDLCEMLKKRI--V--HFFEHYKDLE----
8 PsiBlast_PDB 77.9328% -87 - C7 -2BQY IPYR_HELPY A:[50-144] -----------------------------------------------------------YPANYGFVPNTLGSDGDPVDALVLSDVAFQA---GSVVKARLVGVLNMEDE--SGM-DEKLIALPI--D----------K----------IDPTHSYVKDIDDLSKHT-----------LDKIK------------------HFFETYKDLE----
72 HHSearch 77.6825% -91 - C7 -3D53 IPYR_RICPR A:[36-145] ------------------ESGALFVDRFMQ-------------------T---TMS---YPCNYGFIPDTLSNDGDPVDVLVVAHHPVVP---GSVIKCRAIGVLMMEDESGL-D-EKIIAVPTS--KLD--------ITFDHIKELDDL----------------C-----------EMLKKRI-------------V--HFFEHYKDL-----
7 PsiBlast_PDB 77.3528% -81 - C7 -2BQX - IPYR_HELPY A:[50-144] -----------------------------------------------------------YPANYGFVPNTLGSDGDPVDALVLSDVAFQA---GSVVKARLVGVLNMEDE--SGM-DEKLIALPI--D----------K----------IDPTHSYVKDIDDLSKHT-----------LDKIK------------------HFFETYKDLE----
13 PsiBlast_PDB 76.8827% -45 - C7 -1JFD IPYR_ECOLI A:[32-145] ------------------------IDKESGAL-------------FVDRF---MSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQP---GSVIRCRPVGVLKMTDE--AGE-DAKLVAVPH--S----------K----------L----------------S-----------KEYDHIKDVNDLPELLKAQIA--HFFEHYKDLE----
15 PsiBlast_PDB 76.5627% -39 - C7 -1INO IPYR_ECOLI A:[32-145] ------------------------IDKESGAL-------------FVDRF---MSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQP---GSVIRCRPVGVLKMTDE--AGE-DAKLVAVPH--S----------K----------L----------------S-----------KEYDHIKDVNDLPELLKAQIA--HFFEHYKDLE----
4 PsiBlast_PDB 76.2327% -93 - C7 -3I4Q ? A:[53-148] -----------------------------------------------------------YPANYGYINNTLADDGDALDVLVITPYPVAP---GSVIRARPVGVLKMSDE--AGG-DEKLLAVPH--E----------K----------L----------------TQLYNDIHD---IDDVPQLLKDQI--------V--HFFEHYKDLE----
12 PsiBlast_PDB 75.5327% -60 - C7 -1IPW IPYR_ECOLI A:[32-147] ------------------------IDKESGAL-------------FVDRF---MSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQP---GSVIRCRPVGVLKMTD-----E-DAKLVAVPH--S----------K----------L----------------S-----------KEYDHIKDVNDLPELLKAQIA--HFFEHYKDLE----
11 PsiBlast_PDB 75.2227% -65 - C7 -2EIP - IPYR_ECOLI A:[32-148] ------------------------IDKESGAL-------------FVDRF---MSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQP---GSVIRCRPVGVLKMTD----GE-DAKLVAVPH--S----------K----------L----------------S-----------KEYDHIKDVNDLPELLKAQIA--HFFEHYKDLE----
71 HHSearch 74.6727% -77 - C7 -3GVF ? A:[57-166] ------------------ALGLLVVDRFIG-------------------T---GMR---YPVNYGFIPQTLSGDGDPVDVLVITPFPLLA---GSVVRARALGMLKMTDESGV-D-AKLVAVPHD--KVC--------PMTANLKSIDDV----------------P-----------AYLKDQI-------------K--HFFEQYKAL-----
68 HHSearch 74.1125% -76 - C7 -3TR4 ? A:[38-146] -------------------LGFLTVDRFMP-------------------T---SMR---YPCNYGFVPSTLAQDGDPLDVLVLTPVPVQP---GVLMRVRALGIMKMEDEAGE-D-SKVLAVPVV--KAC--------RAYEAIQSLKDI----------------S-----------SLLLDAI-------------S--HFFERYKDL-----
62 HHSearch 73.9927% -72 * C7 *1SXV IPYR_MYCTU A:[31-140] -----------------HETGRVRLDRYLY-------------------T---PMA---YPTDYGFIEDTLGDDGDPLDALVLLPQPVFP---GVLVAARPVGMFRMVDEHGG-D-DKVLCVPAG--D----------PRWDHVQDIGDV----------------P-----------AFELDAI-------------K--HFFVHYKDLE----
20 PsiBlast_PDB 73.7627% -48 - C7 -1OBW IPYR_ECOLI A:[32-145] ------------------------IDKESGAL-------------FVDRF---MSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQP---GSVTRCRPVGVLKMTDE--AGE-DAKLVAVPH--S----------K----------L----------------S-----------KEYDHIKDVNDLPELLKAQIA--HFFEHYKDLE----
14 PsiBlast_PDB 73.2327% -53 - C7 -1FAJ - IPYR_ECOLI A:[32-148] ------------------------IDKESGAL-------------FVDRF---MSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQP---GSVIRCRPVGVLKMTD----GE-DAKLVAVPH--S----------K----------L----------------S-----------KEYDHIKDVNDLPELLKAQIA--HFFEHYKDLE----
10 PsiBlast_PDB 72.0926% -47 - C7 -4UM4 IPYR_ECOLI A:[41-146] ---------------------------------------------FVDRF---MSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQP---GSVIRCRPVGVLKMTDE--AGE-DAKLVAVPH--S----------K----------L----------------S-----------KEYDHIKDVNDLPELLKAQIA--HFFEHYKDLE----
64 HHSearch 71.3225% -70 - C7 -1QEZ IPYR_SULAC A:[32-141] ------------------EEGVIKVDRVLY-------------------T---SMN---YPFNYGFIPGTLEEDGDPLDVLVITNYQLYP---GSVIEVRPIGILYMKDEEGE-D-AKIVAVPKDKTDPSFSNIKDIND----------L----------------P-----------QATKNKI-------------V--HFFEHYKEL-----
66 HHSearch 71.1225% -82 - C7 -3FQ3 ? A:[57-166] ------------------KAGALIVDRFLY-------------------T---PMT---YPGNYGFVPHTLSEDGDPIDVLVCNTRPLIP---GCVINVRPIGVLVMEDNSGK-D-EKIIAVPSP--HLT--------RRYEKIHDYTDM----------------P-----------EITLKQI-------------A--HFFEHYKDL-----