@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0356: (2016-03-14 )
MLKMGFIGNGKSTNRYHLPFILERDNIEVKTIYNRNPKTATWDKIEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEAKEIFELAKERGLLVQCYQNRRFDSDFLTAQKVIESGKLGELLEVEMHYDYFRPEIPESVHEFKFYDSYLYGHGCHTIDQVLSYFGKPDNIHYDVRQLLGEGRMNDYFDLDLYYGVTKVSVKSSYFRIKARPSFVLYGKKGTFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYGTLTYVDDAGVWHEEKVISEVGDYGRVYDDLYEAIINGKPKQVTDEETLLQMEILEKGVEACK

Atome Classification :

(20 SA) .........10...-.....20...-.--....30....--..-..--40..--..-....50........60........70........80........90........100.......110.......120.....-..130.......140.......150....----.---..160....--...-170.-.......180.....-.--.-190........200.........210....----.----.-.220.......230.-----........240...-....250.......260.......270......-.-280.......290....-...300.......310...--.-...320.......330......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MLKMGFIGNGKSTN-RYHLPFILER-D--NIEVKTIYNR--NP-KT--ATWD--KI-EGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEAKEIFELAKERGLLVQCYQNRRFDSD-FLTAQKVIESGKLGELLEVEMHYDYFRPE----I---PESVHEFKF--YDS-YL-Y-GHGCHTIDQVLSYFG-K--P-DN-IHYDVRQLL--GEGRMNDYFDLDLYYG----V----T-KVSVKSSYFRIK--A-----RPSFVLYGKKGTFT-KETKDRQEEHLKLFYMPSNPDFGIDLPEHYGTL-T-YVDDAGVWHEEKVISEV-GDYGRVYDDLYEAIINGKP--K-QVTDEETLLQMEILEKGVEACK
2 PsiBlast_PDB 87.5846% -80 - C1 -3HNP - ? A:[3-338] -LTMGFIGFGKSAN-RYHLPYLKTR-N--NIKVKTIFVRQINE-EL--AAPY--EE-RGVYFTTDLDELLNDKEIQVVTICTPAHTHYELAKKVILAGKSVIVEKPFCDTVEHAKELLALGREKGVVVMPYQNRRFDGD-FLAVKQVVEQGFLGDIIEIESHIDYFRPG---------SITHEAPK--EEG-SF-Y-SLGIHTMDRMISLFG-R--P-NT-VTYDIRNNE--VEGAVDNYFDVGLHYGN---Q----L-KIKLKTNHIVAK--D-----YPRFIVHGTNGSFI-KYGEDQQENDLKAGIMPESAGFGEDSPMYYGIA-K-YRNANGDWIEKQIKTPL-GDYGRFYDAAYDTIVNGAP--K-LVKDEEAVTNIEILENGFAA--
3 PsiBlast_PDB 87.3645% -78 - C1 -3FD8 ? A:[5-337] -VKMGFIGFGKSAN-RYHLPYVMIR-E--TLEVKTIFDLHVNE-KA--AAPF--KE-KGVNFTADLNELLTDPEIELITICTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGD-YLAMKQVVEQGFLGEINEVETHIDYYRPG---------SITEQGPK--ENG-SF-Y-GLGIHLMDRMIALFG-R--P-DQ-VTYDIRNNE--VSEAVDNYFDVDLHYG----S----KLKVKVKTNHSVAS--P-----YPRFIVHGSNGSFI-KYGEDQQENDLKAGIMPDAPGFGEDSPMYYGEV-T-YRNGNGDWIKKQIKTPV-GDYGRYYDAVYETLKNGAP--Q-LVTKEQALTNIEILEAG-----
29 HHSearch 77.2549% -47 - C1 -3F4L - YHHX_ECOLI A:[2-337] VINCAFIGFGKSTT-RYHLPYVLNRKD--SWHVAHIFRR--HA-KPE-EQAP--IY-SHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSC-FLTAKKAIESGKLGEIVEVESHFDYYRP-----------VAETKPGLPQDG-AF-Y-GLGVHTMDQIISLFG-R--P-DH-VAYDIRSLR--NKANPDDTFEAQLFYG----D----L-KAIVKTSHLVKI--D-----YPKFIVHGKKGSFI-KYGIDQQETSLKANIMPGEPGFAAD--DSVGVL-E-YVNDEGVTVREEMKPEM-GDYGRVYDALYQTITHGAP--N-YVKESEVLTNLEILERGFEQAS
1 PsiBlast_PDB 76.9748% -44 - C1 -3F4L - YHHX_ECOLI A:[2-334] VINCAFIGFGKSTT-RYHLPYVLNRKD--SWHVAHIFRR--HA-KP--EEQA--PIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSC-FLTAKKAIESGKLGEIVEVESHFDYYRP-----V---AETKPGLP---QDG-AF-Y-GLGVHTMDQIISLFG-R--P-DH-VAYDIRSLR--NKANPDDTFEAQLFYG----D----L-KAIVKTSHLVKI--D-----YPKFIVHGKKGSFI-KYGIDQQETSLKANIMPGEPGFAAD--DSVGVL-E-YVNDEGVTVREEMKPEM-GDYGRVYDALYQTITHGAP--N-YVKESEVLTNLEILERGFE---
32 HHSearch 75.1333% -89 - C1 -3FHL ? A:[5-346] IIKTGLAAFGMSGQVF-HAPFISTN-P--HFELYKIVER--SKELS--K--E--RY-PQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDAD-FLTVRDILAKSLLGRLVEYESTFARYRNF---------------------G-LT-Y-NLGSHLIDQAIQLFG-M--P-EA-VFADLGILR--EGGKVDDYFIIHLLHPSLAPN----V-KITLKASYLMRE--A-----EPRFALHGTLGSYV-KYGV---------------PNWGEESEQEWGLL-HTEING--KEICRKYPGIA-GNYGGFYQNIYEHLCLGQP--L-ETHAQDILNVIRIIEAAYQSHR
28 HHSearch 74.6330% -86 - C1 -3GDO - IOLW_BACSU A:[13-349] TIKVGILGYGLSGS-VFHGPLLDVL-D--EYQISKIMTS--RT-E---EVKR--DF-PDAEVVHELEEITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDND-FLTIKKLISEGSLEDINTYQVSYNRYRPE----V--------------ATG-TL-Y-DLGSHIIDQTLHLFG-M--P-KA-VTANVMAQR--ENAETVDYFHLTLDYG----K----L-QAILYGGSIVPA--N-----GPRYQIHGKDSSFI-KYGIDGQEDALRAGRKPEDDSWGADVPEFYGKL-T-TIRGSDK-KTETIPSVN-GSYLTYYRKIAESIREGAA--L-PVTAEEGINVIRIIEAAMESSK
25 HHSearch 74.5130% -77 - C1 -3KUX ? A:[7-341] KIKVGLLGYGYASK-TFHAPLIMGT-P--GLELAGVSSS--DASKV--H--A--DW-PAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSD-FLTLKTLLAEGSLGNVVYFESHFDRYRPE----I---RQRWREQ----GGG-IW-Y-DLGPHLLDQALQLFG-L--P-ET-LNVDLGMLR--PGSQSVDYFHAVLSYP----G----Q-RVVLHSTVLAAA--E-----TARYIVHGTQGSYI-KFGVDPQEDRLKAGERLPQADWGYDMRDGIVTL-S-HDN---VLTEKPLLTLP-GNYPAYYAGIRDAIWGTAP--N-PVPATEAIKVMELIELGIASDQ
8 PsiBlast_PDB 74.4330% -79 - C1 -3GFG - IOLW_BACSU A:[14-349] -IKVGILGYGLSGS-VFHGPLLDVL-D--EYQISKIMTS--RT-EE--VKRDFPDA-EVVH---ELEEITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDND-FLTIKKLISEGSLEDINTYQVSYNRYRPE----V---------------ATGTL-Y-DLGSHIIDQTLHLFG-M--P-KA-VTANVMAQR--ENAETVDYFHLTLDYG----K----L-QAILYGGSIVPA--N-----GPRYQIHGKDSSFI-KYGIDGQEDALRAGRKPEDDSWGADVPEFYGKL-T-TIRGSDK-KTETIPSVN-GSYLTYYRKIAESIREGAA--L-PVTAEEGINVIRIIEAAMESSK
39 HHSearch 74.1928% -77 - C1 -3E82 ? A:[7-338] TINIALIGYGFVGK-TFHAPLIRSV-P--GLNLAFVASR--DEEKVK-RD-----L-PDVTVIASPEAAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSD-YLGIRQVIEQGTLGAVKHFESHFDRFRPE----V---------------SG-LW-F-DLGPHLIDQALQLFG-L--P-QS-VQGNIATLR--DGAEINDWAHVVLNYP----A----H-KVILHCSMLVAG--G-----SSRFTVHGDKGSVI-KARADQQESQLLAGVVPGSADWGQDD----DPL-V-IYDA-SL--QAHAQATPQGDQRQYYMLIRDALKGQIA--N-PVPPVEALAVMAVLEAAVRSAE
7 PsiBlast_PDB 74.0730% -83 - C1 -3GDO - IOLW_BACSU A:[14-349] -IKVGILGYGLSGS-VFHGPLLDVL-D--EYQISKIMTS--RT-EE--VKRDFPDA-EVVH---ELEEITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDND-FLTIKKLISEGSLEDINTYQVSYNRYRPE----V---------------ATGTL-Y-DLGSHIIDQTLHLFG-M--P-KA-VTANVMAQR--ENAETVDYFHLTLDYG----K----L-QAILYGGSIVPA--N-----GPRYQIHGKDSSFI-KYGIDGQEDALRAGRKPEDDSWGADVPEFYGKL-T-TIRGSDK-KTETIPSVN-GSYLTYYRKIAESIREGAA--L-PVTAEEGINVIRIIEAAMESSK
6 PsiBlast_PDB 73.4830% -76 - C1 -3KUX ? A:[8-339] -IKVGLLGYGYASK-TFHAPLIMGT-P--GLELAGVSSS--DA-SKVHADWP--AI-PVV---SDPQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSD-FLTLKTLLAEGSLGNVVYFESHFDRYRPE----I---RQRWREQ-----GG-GIWY-DLGPHLLDQALQLFG-L--P-ET-LNVDLGMLR--PGSQSVDYFHAVLSYP----G----Q-RVVLHSTVLAAA--E-----TARYIVHGTQGSYI-KFGVDPQEDRLKAGERLPQADWGYDMRDGIVTL-S-HDN---VLTEKPLLTLP-GNYPAYYAGIRDAIWGTAP--N-PVPATEAIKVMELIELGIAS--
5 PsiBlast_PDB 73.1832% -90 - C1 -3FHL ? A:[5-344] IIKTGLAAFGMSGQ-VFHAPFISTN-P--HFELYKIVER--S--KE--LSKE--RY-PQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDAD-FLTVRDILAKSLLGRLVEYESTFARYRNF-----------------------GLTY-NLGSHLIDQAIQLFG-M--P-EA-VFADLGILR--EGGKVDDYFIIHLLHP----SLAPNV-KITLKASYLMRE--A-----EPRFALHGTLGSYV-KYGV---------------PNWGEESEQEWGLLHT-EINGKEICRKYPGIA---GNYGGFYQNIYEHLCLGQP--L-ETHAQDILNVIRIIEAAYQS--
9 PsiBlast_PDB 65.4030% -86 - C1 -3E82 ? A:[8-276] -INIALIGYGFVGK-TFHAPLIRSV-P--GLNLAFVASR--DE-EK--VKRD---L-PDVTVIASPEAAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSD-YLGIRQVIEQGTLGAVKHFESHFDRFRPE----V----------------S-GL-WFDLGPHLIDQALQLFG-L--P-QS-VQGNIATLR--DGAEINDWAHVVLNYP----A----H-KVILHCSMLVAG--G-----SSRFTVHGDKGSVI-KARADQQESQLLAGVVPGSADWGQD--------------------------------------------------------------------------
34 HHSearch 62.2119% -59 - C1 -3OHS DHDH_MACFA X:[2-326] ALRWGIVSVGLISS-D-FTAVLQTL-PRSEHQVVAVAAR--DLSRAK-EFAQ--KH-DIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPA-SEALRSVLAQGTLGDLRVARAEFGKNLTH----V-----PRAVDWAQ-AGG-AL-L-DLGIYCVQFISMVFG-GQKP-EK-ISVMGRRH----ETGVDDTVTVLLQYPG---E----V-HGSFTCSITAQ---L-----SNTASVSGTKGMAQ-LLNPCWCPTELVV--KGEH--------KEFLLP-P---V-----PKNCNFDNG-AGMSYEAKHVRECLRKGLKESP-VIPLVESELLADILEEVRRAIG
36 HHSearch 61.9121% -72 - C1 -3EVN - ? A:[5-320] KVRYGVVSTAKVAP-R-FIEGVRLA-G--NGEVVAVSSR--TLESAQ-A-----KY-HLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPM-TQVIKKLLASGEIGEVISISSTTAYPNID--------HVTWFRELEL-GGG-TV-H-FMAPYALSYLQYLFD-AT-I-TH-ASGTAT-F---PKGQSDSQSKLLLQLSN---G----V-LVDIFLTTRLN---L-----PHEMIIYGTEGRLI-IPHFWKT-THAKL--VRND--------TSA--------------RTI-QVDMV-SDFEKEAYHVSQMILEGQRVSH-IMTPQLTLSGVKIIEDLYRSWG
26 HHSearch 61.4318% -75 * C1 *1ZH8 ? A:[18-331] KIRLGIVGCGIAAR-ELHLPALKNL-SH-LFEITAVTSR--TRSHAE-EFAK--MV-GNPAVFDSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPA-FWKAKELVESGAIGDPVFMNWQIWVGMDENNKYV---HTDWRKKPKH-VGG-FL-S-DGGVHHAAAMRLILG-E--I-EW-ISAVAKDLS--PLLGGMDFLSSIFEFEN---G----T-VGNYTISYSLK---G-----NERFEITGTKGKIS-ISWDK-----IVL----NE--------EE------------------MKVPQE-NSYQKEFEDFYQVVAEGKP--NDLGSPVQALKDLAFIEACVRSAG
30 HHSearch 59.8116% -63 - C1 -2P2S ? A:[4-333] KIRFAAIGLAHNHI-YDMCQQLI-D-A--GAELAGVFES--DSDNRA-KFTS--LF-PSVPFAASAEQLITDASIDLIACAVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELVQRGEIGRVIQTMGVGPHRERG----A---RPDWFYQKRQ-YGG-IL-C-DIGIHQIEQFLYFTG-N--TNARVVTSQTANYHHPHHPEFEDFGDAMLLGDN---G----A-TGYFRCDWFTPD--GLSVWGDGRLTILGTEGYIE-IRKYVDLT--RG----ESN---------V---V-Y-LVNGKG---EQRFTPAG-SVERAFFPDFLRDCRERTE--N-AMSQSHIFKATELSILAQQAAN
35 HHSearch 58.8615% -65 - C1 -3M2T ? A:[5-331] LIKVGLVGIGAQMQ-ENLLPSLLQM-Q--DIRIVAACDS--DLERAR-RVHR--FI-SDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARP-VRQLREMTQVDEFGETLHIQLNHYANKPR--------APLWGLDST--LRS-FL-L-AQAIHTIDLAITFGDGE--L-RR-VQSSVQR------HDDALIVRADMAFSS---G----A-TASLLAGTSFPY--F-----EFDMKLVSSSSTLVELDNLWN--ITLHE---PEHATRPTGAAKRWRGA-W-QPG------PLDSGYER-SGYHGELHQFFQAIREHRR--F-EADFASLLPTYRVIEEICSADA
37 HHSearch 58.7516% -61 - C1 -3RC1 ? A:[27-345] PIRVGVIGCADIAW-RRALPALEAE-P--LTEVTAIASR--RWDRAK-RFTE--RF-G-GEPVEGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQ-HRQVADMLDEGVIGEIRSFAASFTIPPKP--------QGDIRYQADV-GGG-AL-L-DIGVYPIRAAGLFLG-AD-L-EF-VGAVLRHER---DRDVVVGGNALLTTRQ---G----V-TAQLTFGMEHA---Y-----TNNYEFRGSTGRLW-MNRVFTPP-ATYQ---PV---------VH---I-E-RQD---H-AEQFVLPAH-DQFAKSIRAFAQAVLSGEH--P-REWSEDSLRQASLVDAVRTGAR
41 HHSearch 58.0713% -61 - C1 -3Q2I ? A:[13-343] KIRFALVGCGRIAN-N-HFGALEKH-AD-RAELIDVCDI--DPAALK-AAVE--RT-G-ARGHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNAT-LQLLKRAMQEKRFGRIYMVNVNVFWTRPQ----EYYDAAGWRGTWEF-DGG-AF-M-NQASHYVDLLDWLIG-P--V-ES-VQAYTATLA--RNIEVEDTGTVSVKWRS---G----A-LGSMNVTMLTYPKNL-----EGSITILGEKGSVR-VGGVAVNEIQHWE---FSE------PHAMDEEI-K-D-A---S---------G-FGHPLYYDNVIKTMRGEAT--P-ETDGREGLKSLELLIAMYLSAR