@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0371: (2016-03-15 )
MSGMAKYMEIYIDIRDKINQNKYEINEKLPDGDSLARVYDCSKLTVKKALDMLVQEGMVIRRRGAGTFVKSHSTNGGEFALGPMSGLVNTFGKDNIKSKVILFSIEKPSKEVAEKLEMQDDYIYRIIRMREVGHKAYSIEHTYMPLAIIPGLEPRHLEDSIYNYIRDDLKLKMQSAHVWVRGDKSNQEDSKLLDLEEPTFMMEIEKLAHLEDGRVFEYSITRHTYESFVFETVFVQN

Atome Classification :

(20 SA) .........10........20........30....-....40........50........60........70........80........90--......--..100..-.....110....-..-.-120........130.......140.......150...-.--.-..----160.....-..170.......180.......190.......200........210.......220.......230.....-
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MSGMAKYMEIYIDIRDKINQNKYEINEKLPDGDSL-ARVYDCSKLTVKKALDMLVQEGMVIRRRGAGTFVKSHSTNGGEFALGPMSGLVNTF--GKDNIK--SKVILFS-IEKPSKEVAEKL-EM-Q-D-DYIYRIIRMREVGHKAYSIEHTYMPLAIIPGLEPR-H--L-ED----SIYNYIRD-DLKLKMQSAHVWVRGDKSNQEDSKLLDLEEPTF-MMEIEKLAHLEDGRVFEYSITRHTYESFVFETVFVQN-
1 PsiBlast_PDB 90.7130% -96 - C1 -3BWG YYDK_BACSU A:[8-230] -------QQIATEIETYIEEHQLQQGDKLPVLETL-MAQFEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKRKG-YISLLSNQG--------DFNVT--SKVIELD-VRKPTPEAAENL-NIGM-D-EDIYYVKRVRYINGQTLCYEESYYTKSIVTYLNNE-I--V-SH----SIFHYIRE-GLGLKIGFSDLFLHVGQLNEEEAEYLGLEAGLP-KLYIESIFHLTNGQPFDYSKISYNYEQSQF--------
28 HHSearch 89.2630% -90 - C1 -3BWG YYDK_BACSU A:[8-236] -------QQIATEIETYIEEHQLQQGDKLPVLETL-MAQFEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKR-KGYISLLSNQG--------DFNVT--SKVIELD-VRKPTPEAAENLNIG-M-D-EDIYYVKRVRYINGQTLCYEESYYTKSIVTYLNNE-I--V-SH----SIFHYIRE-GLGLKIGFSDLFLHVGQLNEEEAEYLGLEAGLP-KLYIESIFHLTNGQPFDYSKISYNYEQSQFVVQANS--
49 Fugue 89.0430% -92 - C1 -3BWG YYDK_BACSU A:[8-236] -------QQIATEIETYIEEHQLQQGDKLPVLETLMAQ-FEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKRKGYISLLSNQGDF---------NVT--SKVIELD-VRKPTPEAAENL-NI-GMD-EDIYYVKRVRYINGQTLCYEESYYTKSIVTYLNNE-I--V-SH----SIFHYIRE-GLGLKIGFSDLFLHVGQLNEEEAEYLGLEAGLP-KLYIESIFHLTNGQPFDYSKISYNYEQSQFVVQANS--
5 PsiBlast_PDB 75.9522% -84 - C1 -2WV0 YVOA_BACSU A:[7-235] -SPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREY-AEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFV---SKPKMEQALQGLTSFTEDM--KSRGMTPGSRLIDYQ-LIDSTEELAAIL-GCGH-P-SSIHKITRVRLANDIPMAIESSHIPFELAGELNES-H--F-QS----SIYDHIER-YNSIPISRAKQELEPSAATTEEANILGIQKGAP-VLLIKRTTYLQNGTAFEHAKSVYRGDRYTF--------
3 PsiBlast_PDB 73.6722% -89 - C1 -4U0V YVOA_BACSU A:[15-238] ------YYQIMEQLKTQIKNGELQPDMPLPSEREY-AEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFV---SKPKMEQALQGLTSFTEDM--KSRGMTPGSRLIDYQ-LIDSTEELAAIL-GCGH-P-SSIHKITRVRLANDIPMAIESSHIPFELAGELNES-H--F-QS----SIYDHIER-YNSIPISRAKQELEPSAATTEEANILGIQKGAP-VLLIKRTTYLQNGTAFEHAKSVYRGDRYTF--------
4 PsiBlast_PDB 73.3322% -84 - C1 -4U0W YVOA_BACSU A:[15-238] ------YYQIMEQLKTQIKNGELQPDMPLPSEREY-AEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFV---SKPKMEQALQGLTSFTEDM--KSRGMTPGSRLIDYQ-LIDSTEELAAIL-GCGH-P-SSIHKITRVRLANDIPMAIESSHIPFELAGELNES-H--F-QS----SIYDHIER-YNSIPISRAKQELEPSAATTEEANILGIQKGAP-VLLIKRTTYLQNGTAFEHAKSVYRGDRYTF--------
29 HHSearch 69.3718% -67 - C1 -3F8M PHNF_MYCS2 A:[14-241] ----LKHQVVRAELDRMLD-G-MRIGDPFPAEREI-AEQFEVARETVRQALRELLIDGRVER-RGRTTVVARPKI-RQP---LGMGSYTEAAKAQGLSAG--RILVAWS-DLTADEVLAGVLGVD-V-G-APVLQLERVLTTDGVRVGLETTKLPAQRYPGLRETFD--H-EA----SLYAEIRS--RGIAFTRTVDTIDTALPDAREAALLGADARTP-MFLLNRVSYDQDDVAIEQRRSLYRGDRMTFTAVMHA--
2 PsiBlast_PDB 68.9839% -96 - C1 -3L5Z - ? A:[7-147] ------------------------------------------------------------------------------------------------SEVE--SKIIEFT-IVGADEIIAEKL-GI-SVG-DFVYKIIRLRIIHSIPTIMEHTWMPIAVIPGVEAS-V--L-EE----SIYSYIQN-KLGLKVGTSVVRVKGIRPDDKEKQFMNLTNQDF-LMRVEQVAYLTDGRTFEYSYADHLPETFEFETV-----
32 HHSearch 65.3222% -73 - C1 -3EDP ? A:[7-235] --KKPLFEVIASKIKDSINRDEYKTG--MPNETAL-QEIYSSSRTTIRRAVDLLVEEGLVVRKNGVGLYVQPKLT-AQ--NILEMTGVMKN-------LK--KDIKDFY-IRKAGKFYAEIFGMK-E-N-ELVYSIKFVQKS-EHGATLDRLILPLGLYPDLQAK-D--FQII----NIIELVNS--GKYKLFELEQELQLILAGNEQIKNMHLNENDP-VFKLSSVFYAENDMPIAIQYHYEDAESTKYVVDF----
51 Fugue 62.8717% -74 - C1 -3F8M PHNF_MYCS2 A:[14-243] -----LKHQVVRAELDRMLDG-MRIGDPFPAEREI-AEQFEVARETVRQALRELLIDGR-VERRGRTTVVARPKIRQP-LGMGSYTEAAKAQ--GL-SAG--RILVAWS-DLTADEVLAGVL-GV-D-VGAPVLQLERVLTTDGVRVGLETTKLPAQRYPGLRET-F--D-HEA---SLYAEIRS--RGIAFTRTVDTIDTALPDAREAALLGADARTP-MFLLNRVSYDQDDVAIEQRRSLYRGDRMTFTAVMHAKN
52 Fugue 61.6228% -95 - C1 -2OGG TRER_BACSU A:[9-152] --------------------------------------------------------------------------------------------------TK--TTVHKFG-LEPPSELIQKQL-RA-NLD-DDIWEVIRSRKIDGEHVILDKDYFFRKHVPHLTKE-I--C-EN----SIYEYIEG-ELGLSISYAQKEIVAEPCTDEDRELLDLRGYDHMVV-VRNYVFLEDTSLFQYTESRHRLDKFRFVDFARRGK
7 PsiBlast_PDB 60.2230% -85 - C1 -2OGG TRER_BACSU A:[9-144] -------------------------------------------------------------------------------------------------T-K--TTVHKFG-LEPPSELIQKQL-RA-NLD-DDIWEVIRSRKIDGEHVILDKDYFFRKHVPHLTKE-I--C-EN----SIYEYIEG-ELGLSISYAQKEIVAEPCTDEDRELLDLRGYDH-MVVVRNYVFLEDTSLFQYTESRHRLDKFRF--------
41 HHSearch 55.8123% -83 - C1 -2OOI ? A:[6-161] ----------------------------------------------------------------------------------FKTNGFSKS----R--MT--SKVLVFKEMATPPKSVQDELQLN-A-D-DTVYYLERLRFVDDDVLCIEYSYYHKEIVKYLNDD-I--A-KG----SIFDYLES-NMKLRIGFSDIFFNVDKLTSSEASLLQLSTGEP-CLRYHQTFYTMTGKPFDSSDIVFHYRHAQFYIPSK---
6 PsiBlast_PDB 55.8124% -92 - C1 -3EDP ? A:[18-159] -------------IKDSINRDEYKTG--MPNETAL-QEIYSSSRTTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTAQN---ILEMTGVMKN-------LK--KDIKDFY-IRKAGKFYAEIF-GM-K-E-NELVYSIKFVQKSEHGATLDRLILPLGLYPDLQAK-D--F-Q--------------------------------------------------------------------------------------
56 Fugue 51.5223% -72 - C1 -2P19 - ? A:[2-149] ------------------------------------------------------------------------------------------KN--ANLDPK--TRVLEHR-LLAASSAIAEKL-GV-S-AGDEVLLIRRLRSTGDIPVAILENYLPPAFNDVSLDE-L--E-KG----GLYDALRS--RGVVLKIANQKIGARRAVGEESTLLDIEDGGP-LLTVERVALDNSGQVIELGSHCYRPDMYNFETTLVAR-
22 PsiBlast_CBE 50.8733% -95 - C1 -4EGZ ARAR_BACSU B:[22-87] ---LPKYAQVKEEISSWINQGKILPDQKIPTENEL-MQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37 HHSearch 49.4015% -74 - C1 -3CNV ? A:[5-161] ------------------------------------------------------------------------------------FLRLAPDE------AE--SRILECR-RLRAPAEIARALELR-A-G-ETVVTIRRQLSMNHMPTVIDDLWLPGTHFRGLTLELLTAS-KA----PLYGLFES-EFGVSMVRADEKLRAVAASPEIAPLLGVEPGRP-LLQVDRISYTYGDRPMEVRRGLYLTDHYHYRNSL----
12 PsiBlast_PDB 49.3325% -64 - C1 -2P19 - ? A:[9-147] ---------------------------------------------------------------------------------------------------K--TRVLEHR-LLAASSAIAEKL-GV-SAG-DEVLLIRRLRSTGDIPVAILENYLP----PAFNDV-S--L-DELEKGGLYDALRSRGVVLKIANQKIGAR--RAVGEESTLLDIEDGGP-LLTVERVALDNSGQVIELGSHCYRPDMYNFETTLV---
26 PsiBlast_CBE 49.2332% -98 - C1 -4U0Y YVOA_BACSU B:[10-77] -SPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREY-AEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 HHSearch 49.1224% -65 - C1 -2P19 - ? A:[5-147] -----------------------------------------------------------------------------------------------NLDPK--TRVLEHR-LLAASSAIAEKLGVS-A-G-DEVLLIRRLRSTGDIPVAILENYLPPAFNDVSLDE-L--E-KG----GLYDALRS--RGVVLKIANQKIGARRAVGEESTLLDIEDGGP-LLTVERVALDNSGQVIELGSHCYRPDMYNFETTLV---