@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Lmo0785: (2016-03-18 )
MKRIDRIYEFILENPSTKTIREQLEQNEGFTASTISETLSILRNNVSMELNELHRQGKIIKIVGRPVLYFPKKAVEDEIGRTLSDNELEFDSCEPLLKMLKPSIVERSPFDDLIGVNDSLKTPVEQAKAAVLYPPNGLHTMILGQTGVGKTLFANLMYRFSQHAKRLPADAPFIIFNCADYYNNPQLLMSHIFGHVKGAFTGAENDKGGLVEKAEGGILFLDEIHRLPPEGQEMIFYLMDSGTYNKLGETDRTRKSNVLIIGATTENPESSLLKTFMRRIPIIITLPSLEERTAFERVELLKYLLSSEAHRVNKPIRIEDEAAKALIGNTTYGNIGQLKSNIQLVCAQGFLNSFDKDEEILIDFKTLPINIKDGFFHFSNRRKELQAIAEYLEPYTTIFPELNNTLITSDEYEPNFNLYKIIEDKASILMDQGVEDDDIKKFIKMDIDIHLNSFYNKFKNTIHNRENILKIVNEEILNFAEGVELRIEHQLGKKLNERFLLAFSLHLTSFIKRIESNKPLKYTNIENVVNDQPEAYELSREIKDDIEATFHIRVPNMEVMYLTLLISSLLKEQENARVAVLVATHGNNTASSMVSVAKKLLGEGLVEGIDMPLDQSPKIVLDKLTERAKEMDMGRGLLLLVDMGSLTSFAPVISERTGIPVRSIDMVSTATVIEAVRKSNILDMELDSIYDSLKDFRGYGGYNSDDDTLDSNQKPHAIITICATGEGTAEKLQLFIENILDTITTDAIKVIPIGLHEMDTKLEQLQEENDILMAVGIQDPKIQIPFIPLERLFGIDGEEQLVSLVKQRNIIVKKGETGRIAKEIIEESLNEFLTYLNPKKTIEILSSFASVLEKKLGYKLDNTFKINLLIHVGCALERMVLNDGLIYREPKDMLETNIFKALEQTNKEVIYKMNLKLTNDELCYLYDILNEIQPEVLS
Atome Classification :
(20 SA)
--------.........10...--.....20........30........40..------......50........60...----.....70........80........------90........100.......110.......120....-...130.......140.......150.......160.......170.......180....-...190.......200.......210.......220.......230.......240.......250.......260.....-----.----.270---...-----.....-----.280-.-.-......290.......300.......310..-.-.--.-..320.......330.......340.......350.......360.......370.......380.......390.......400....-...410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
--------M
K
R
I
D
R
I
Y
E
F
I
LEN--PS
T
K
T
I
R
E
Q
L
E
QNEGF
T
A
S
T
I
S
E
T
L
S
I
L
R
------
N
NV
S
M
E
L
N
E
L
HRQG
K
I
I
K
I
VG----RP
V
L
YF
P
K
K
A
V
E
D
E
IGRTLSDNELE------F
D
S
C
E
P
L
L
K
ML
K
P
S
I
VERSPF
D
D
L
IGVNDSLKT
P
V
E
Q-A
K
A
A
V
L
YPPNG
L
H
T
M
I
L
GQTGV
G
K
T
L
F
A
N
L
M
Y
R
F
S
Q
H
A
K
RLPADA
P
F
I
I
F
N
C
A
D
YYN
N
P
Q
-
L
L
M
S
H
I
F
G
H
V
K
GAFTGAENDKGG
L
V
EKAEG
G
I
L
F
L
D
E
I
HRLPPEGQ
E
M
I
F
Y
L
MDSGTYNKLGETDRTRKS
N
V
L
I
I
GATTEN-----P----
E
S
-----
S
L
L
-----
K
T
F
M
R
-----RI-
P
-
I
-
I
-
I
TLPS
L
E
E
R
T
A
F
E
R
V
E
L
L
K
Y
L
L
S
S
E
A
H
RVNK-
P
-
I
--
R
-I
E
D
E
A
A
K
A
L
IGNTTYG
N
I
G
Q
L
KSNI
Q
L
V
C
A
Q
G
F
L
N
SFDKD
E
E
I
L
I
D
F
K
T
L
P
I
NIKDG
F
F
H
F
S
N
R
R
K
E
L
Q
A
I
A
E
Y
L
E
P
Y
T
T
I
F
PELNN
T
L
-ITSDEYEPNF
N
L
Y
K
I
I
E
D
K
A
S
I
L
M
DQGV
E
D
D
D
I
K
K
F
I
K
M
D
I
D
I
H
L
N
S
F
Y
N
K
F
K
N
T
IH
N
R
E
N
I
L
K
I
V
N
E
E
I
L
N
F
AEG
V
E
L
R
I
E
H
Q
L
G
K
K
L
N
E
R
F
L
L
A
F
S
L
H
L
T
S
F
I
K
R
IESNKP
L
K
YT
N
I
E
N
V
VNDQP
E
A
Y
E
L
S
R
E
I
K
DDI
E
A
T
F
H
I
RVPN
M
E
V
M
Y
L
T
L
L
I
S
S
L
L
K
EQEN
A
R
V
A
V
L
V
A
THGNN
T
A
S
S
M
V
S
V
A
K
K
L
L
G
E
G
L
V
EGIDMPLDQS
P
K
I
V
L
D
K
L
T
E
R
A
K
E
M
DMGR
G
L
L
L
L
V
DMGSL
T
S
F
A
P
V
I
SERTGI
P
V
R
S
I
D
M
V
S
T
A
T
V
I
E
A
V
R
KSNILD
M
E
L
D
S
I
Y
D
S
L
K
D
F
RGYGGYNSDDDTLDSNQKP
H
A
I
I
T
I
CATGE
G
T
A
E
K
L
Q
L
F
I
E
N
I
L
D
T
I
TTD
A
I
K
V
I
P
I
G
L
H
E
M
D
T
K
L
E
Q
L
QEEN
D
I
L
M
A
VGIQDP
K
I
Q
IPFI
P
L
E
R
L
FGID
G
E
E
Q
L
V
S
L
V
K
QR
N
I
I
V
KKGET
G
R
I
A
K
E
I
I
E
E
S
L
N
E
F
L
T
YL
N
P
K
K
T
I
E
I
L
S
S
F
A
S
V
L
E
K
KLGYKLD
N
T
F
K
I
N
L
L
I
H
V
G
C
A
L
E
R
M
V
LNDG
L
I
YRE
P
K
D
M
L
E
T
N
I
F
K
A
L
E
QTNK
E
V
I
Y
K
M
N
L
K
LTND
E
L
C
Y
L
Y
D
I
L
N
E
I
Q
P
E
VLS
142
Fugue
90.52
24%
-68
- C6 -
1NY5
8
?
A:
[1-384]
M
N
V
L
V
I
E
D
D
K
V
F
R
G
L
L
E
E
Y
L
S
M
K
G
I
K
V
E
S
A
E
R
G
K
E
A
Y
K
L
L
S
E
K
H
F
N
V
V
L
L
D
L
L
LPDVN
G
L
E
I
L
K
W
I
K
E
R
S
P
E
T
E
V
I
V
I
T
G
H
GT
I
K
T
A
V
E
A
M
K
M
G
A
Y
D
F
L
T
K
P
C
M
L
E
E
I
E
L
T
I
N
K
A
I
E
H
R
K
L
R
K
E
N
E
L
L
R
R
E
K
D
L
K
E
E
E
Y
V
F
E
S
P
K
M
K
E
I
L
E
K
-
I
K
K
I
S
---
C
A
E
C
P
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
--
P
R
D
-
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
E
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
-----
I
----
K
E
-----
L
V
K
E
GKFR
E
D
L
Y
Y
-----
R
L
-
G
V
I
-
E
-
I
E
I
P
P
L
R
E
R
-
K
E
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
E-
G
-
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
R
A
V
L
F
S
--------
E
G
K
F
I
D
R
G
E
L
S
C
L
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
135
Fugue
85.04
27%
-68
* C6 *
1OJL
1
ZRAR_SALTY
A:
[3-304]
-----------------------------------------------------------------------------------------------------------------------------------------
H
M
I
G
S
S
P
A
M
Q
H
L
L
N
E
-
I
A
M
V
A
---
P
S
D
A
T
V
L
I
H
G
D
S
G
T
G
K
E
L
V
A
R
A
L
H
A
C
S
A
R
S
-----
D
R
P
L
V
T
L
N
C
A
A
L
--
N
E
S
-
L
L
E
S
E
L
F
G
H
E
K
G
A
F
T
K
R
---
R
E
G
R
F
V
E
A
D
G
G
T
L
F
L
D
E
I
G
D
I
S
P
L
M
Q
V
R
L
L
R
A
I
Q
E
R
E
V
Q
R
V
G
S
N
-
Q
T
I
S
V
D
V
R
L
I
A
A
T
H
R
D
-----
L
----
A
E
-----
E
V
S
A
GRFR
Q
D
L
Y
Y
-----
R
L
N
V
-
V
-
A
-
I
E
M
P
S
L
R
Q
R
R
E
-
D
I
P
L
L
A
D
H
F
L
R
R
F
A
E
R
N
R
K
-
V
-
V
--
K
G
F
T
P
Q
A
M
D
L
L
I
H
Y
D
W
P
G
N
I
R
E
L
E
N
A
I
E
R
A
V
V
L
L
T
G
E
Y
I
S
E
R
E
--------
L
P
L
A
I
A
Y
S
G
E
I
Q
P
L
V
D
V
E
K
E
V
I
L
A
A
L
E
K
T
G
G
N
K
T
E
A
A
R
Q
L
G
I
T
R
K
T
L
L
A
K
L
S
R
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
111
HHSearch
84.23
29%
-70
* C5 *
3DZD
1
?
A:
[130-361]
-----------------------------------------------------------------------------------------------------------------------------------------
E
F
V
G
E
H
P
K
I
L
E
I
K
R
L
-
I
P
K
I
A
---
K
S
K
A
P
V
L
I
T
G
E
S
G
T
G
K
E
I
V
A
R
L
I
H
R
Y
S
G
R
------
K
G
A
F
V
D
L
N
C
A
S
I
P
Q
--
E
-
L
A
E
S
E
L
F
G
H
E
K
G
A
F
T
G
A
L
T
R
K
K
G
K
L
E
L
A
D
Q
G
T
L
F
L
D
E
V
G
E
L
D
Q
R
V
Q
A
K
L
L
R
V
L
E
T
G
S
F
T
R
L
G
G
N
-
Q
K
I
E
V
D
I
R
V
I
S
A
T
N
K
N
-----
L
----
E
E
E
I
K
K
G
N
F
R
-----
E
D
L
Y
Y
-----
R
L
S
V
-
F
-
Q
-
I
Y
L
P
P
L
R
E
R
G
-
K
D
V
I
L
L
A
E
Y
F
L
K
K
F
A
K
E
Y
K
K
-
N
C
F
--
E
-
L
S
E
E
T
K
E
Y
L
M
K
Q
E
W
K
G
N
V
R
E
L
K
N
L
I
E
R
A
V
I
L
C
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
79.79
27%
-54
- C5 -
2VII
2
PSPF_ECOLI
A:
[7-259]
-----------------------------------------------------------------------------------------------------------------------------------------
N
L
L
G
E
A
N
S
F
L
E
V
L
E
Q
V
S
H
L
A
P
L
D
K
P
----
V
L
I
I
G
E
R
G
T
G
K
E
L
I
A
S
R
L
H
Y
L
S
S
R
W
Q
-----
G
P
F
I
S
L
N
C
A
A
L
--
N
E
N
-
L
L
D
S
E
L
F
G
H
E
A
------
Q
K
R
H
P
G
R
F
E
R
A
D
G
G
T
L
F
L
D
E
L
A
T
A
P
M
M
V
Q
E
K
L
L
R
V
I
E
Y
G
E
L
E
R
V
G
G
S
Q
P
L
Q
V
N
V
R
L
V
C
A
T
N
A
D
L
-----
P
A
M
V
N
E
G
-----
T
F
R
-----
A
D
L
L
D
-----
R
L
-
A
-
F
D
V
-
V
Q
L
P
P
L
R
E
R
E
S
-
D
I
M
L
M
A
E
Y
F
A
I
Q
M
C
R
E
I
K
L
-
P
-
L
FP
G
-
F
T
E
R
A
R
E
T
L
L
N
Y
R
W
P
G
N
I
R
E
L
K
N
V
V
E
R
S
V
Y
R
H
G
T
S
D
Y
P
L
D
D
I
I
I
D
P
F
K
R
R
P
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
84
PsiBlast_CBE
79.55
31%
-81
- C5 -
3M0E
3
?
D:
[42-243]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
A
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
IKELV
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
86
PsiBlast_CBE
79.15
31%
-80
- C5 -
3M0E
4
?
B:
[42-243]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
A
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
IKELV
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
80
PsiBlast_CBE
78.96
31%
-77
- C5 -
1NY5
3
?
B:
[163-364]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
E
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
IKELV
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
83
PsiBlast_CBE
78.94
31%
-79
- C5 -
3M0E
3
?
E:
[42-243]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
A
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
IKELV
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
81
PsiBlast_CBE
78.86
31%
-78
- C5 -
3M0E
4
?
G:
[42-243]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
A
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
IKELV
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
85
PsiBlast_CBE
78.84
31%
-79
- C5 -
3M0E
4
?
C:
[42-243]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
A
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
IKELV
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
78.73
31%
-79
- C5 -
3M0E
4
?
A:
[42-243]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
A
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
I
K
E
L
V
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
78.29
32%
-62
- C5 -
3DZD
1
?
A:
[155-355]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
T
G
K
E
I
V
A
R
L
I
H
R
Y
S
G
R
------
K
G
A
F
V
D
L
N
C
A
S
I
---
P
Q
E
L
A
E
S
E
L
F
G
H
E
K
G
A
F
T
G
A
L
T
R
K
K
G
K
L
E
L
A
D
Q
G
T
L
F
L
D
E
V
G
E
L
D
Q
R
V
Q
A
K
L
L
R
V
L
E
T
G
S
F
T
R
L
G
G
N
Q
K
I
-
E
V
D
I
R
V
I
S
A
T
N
K
N
-----
L
----
E
E
-----
E
I
K
-----
K
G
N
F
R
E
D
L
Y
Y
R
L
-
S
-
V
-
F
Q
I
Y
L
P
P
L
R
E
R
G
K
-
D
V
I
L
L
A
E
Y
F
L
K
K
F
A
K
E
Y
K
K
N
C
-
F
--
E
-
L
S
E
E
T
K
E
Y
L
M
K
Q
E
W
K
G
N
V
R
E
L
K
N
L
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
82
PsiBlast_CBE
78.13
31%
-77
- C5 -
3M0E
4
?
F:
[42-243]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
A
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
IKELV
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
78.00
27%
-55
- C- -
2C98
1
PSPF_ECOLI
A:
[8-258]
------------------------------------------------------------------------------------------------------------------------------------------
L
L
G
E
A
N
S
F
L
E
V
L
E
Q
V
S
H
L
A
P
L
D
K
P
----
V
L
I
I
G
E
R
G
T
G
K
E
L
I
A
S
R
L
H
Y
L
S
S
R
W
Q
-----
G
P
F
I
S
L
N
C
A
A
L
--
N
E
N
-
L
L
D
S
E
L
F
G
H
E
A
------
Q
K
R
H
P
G
R
F
E
R
A
D
G
G
T
L
F
L
D
E
L
A
T
A
P
M
M
V
Q
E
K
L
L
R
V
I
E
Y
G
E
L
E
R
V
G
G
S
Q
P
L
Q
V
N
V
R
L
V
C
A
T
N
A
D
L
-----
P
A
M
V
N
E
G
-----
T
F
R
-----
A
D
L
L
D
-----
R
L
-
A
-
F
D
V
-
V
Q
L
P
P
L
R
E
R
E
S
-
D
I
M
L
M
A
E
Y
F
A
I
Q
M
C
R
E
I
K
L
-
P
-
L
FP
G
-
F
T
E
R
A
R
E
T
L
L
N
Y
R
W
P
G
N
I
R
E
L
K
N
V
V
E
R
S
V
Y
R
H
G
T
S
D
Y
P
L
D
D
I
I
I
D
P
F
K
R
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
58
PsiBlast_CBE
77.99
31%
-71
- C5 -
4LY6
40
?
W:
[44-245]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
E
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
IKELV
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
77.98
31%
-73
- C5 -
1NY5
7
?
A:
[163-364]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
E
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
I
K
E
L
V
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
PsiBlast_CBE
77.50
31%
-79
- C5 -
1NY6
1
?
M:
[43-244]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
E
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
IKELV
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
77.35
31%
-73
- C5 -
1NY6
2
?
N:
[43-244]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
E
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
IKELV
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
PsiBlast_CBE
77.33
31%
-80
- C5 -
1NY6
1
?
K:
[43-244]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
E
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
IKELV
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
PsiBlast_CBE
77.30
31%
-74
- C5 -
1NY6
1
?
C:
[43-244]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
I
T
G
E
S
G
V
G
K
E
V
V
A
R
L
I
H
K
L
S
D
R
S
K
E
-----
P
F
V
A
L
N
V
A
S
I
P
R
D
---
I
F
E
A
E
L
F
G
Y
E
K
G
A
F
T
G
A
V
S
S
K
E
G
F
F
E
L
A
D
G
G
T
L
F
L
D
E
I
G
E
L
S
L
E
A
Q
A
K
L
L
R
V
I
E
S
G
K
F
Y
R
L
G
-
G
R
K
E
I
E
V
N
V
R
I
L
A
A
T
N
R
N
I
K
E
L
V
K
----
E
G
-----
K
F
R
-----
E
D
L
Y
Y
-----
R
L
-
G
-
V
-
I
E
I
E
I
P
P
L
R
E
R
K
E
-
D
I
I
P
L
A
N
H
F
L
K
K
F
S
R
K
Y
A
K
-
E
-
V
--
E
G
F
T
K
S
A
Q
E
L
L
L
S
Y
P
W
Y
G
N
V
R
E
L
K
N
V
I
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------