@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1016: (2016-03-20 )
LLKKLITTAVLAMLIFTLAACGTTLAPYDAKKDLGEQINYTITGIDAGAGIMLATQNAIKDYHLDDDNWQLQTSSTAAMTSTLQKAMKDKRPIVVTGWTPHWMFTKFDLKFLDDPKNVYGNAENIHTIVRKGLKEDKPSAYQVLDNFFWTAEDMSEVMLEVNDGVDPEEAAKKWIKNNPDKVAKWTDGVEKVDGDEIKLTYVAWDSEIASTNVVAEALKQVGYKPTIQAMEIQPMWASVATDAADGMVAAWLPNTSGIYYKDYKGKFEDLGPNLKGAKIGLAVPKYMTNINSIEDLKTSK

Atome Classification :

(20 SA) -----------------------------------------------------------------------------------.........10........20........30........40-------.........50........60.-.......70........80........90........100.....----..110.......120-....-----------------.....130.......140.......150.......160.-..----.....170.........180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------------------------------------------------------------------------------LLKKLITTAVLAMLIFTLAACGTTLAPYDAKKDLGEQINY--------TITGIDAGAGIMLATQNAIKDY-HLDDDNWQLQTSSTAAMTSTLQKAMKDKRPIVVTGWTPHWMFTKF----DLKFLDDPKNVYG---NAEN-----------------IHTIVRKGLKEDKPSAYQVLDNFFWTAEDMSEVMLEV-N-DG----VDPEEA--AKKWIKNNPDKVAKWTDGVEKVDGDEIKLTYVAWDSEIASTNVVAEALKQVGYKPTIQAMEIQPMWASVATDAADGMVAAWLPNTSGIYYKDYKGKFEDLGPNLKGAKIGLAVPKYMTNINSIEDLKTSK
1 PsiBlast_PDB 99.1851% -88 - C5 -2B4L OPUAC_BACSU A:[1-267] ---------------------------------------------------------------------------------------------------------------DENASAAEQVNK--------TIIGIDPGSGIMSLTDKAMKDY-DLND--WTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRY----KLKYLDDPKQSYG---SAEE-----------------IHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKV-E-EG----EKPAKV--AAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLK---
51 Fugue 99.1551% -87 - C5 -2B4L OPUAC_BACSU A:[1-268] ---------------------------------------------------------------------------------------------------------------DENASAAEQVNK--------TIIGIDPGSGIMSLTDKAMKDY-DLND--WTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRY----KLKYLDDPKQSYG---SAEE-----------------IHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKV-E-EG----EKPAKV--AAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLKK--
24 PsiBlast_CBE 98.0951% -90 - C5 -2B4M OPUAC_BACSU B:[5-267] -------------------------------------------------------------------------------------------------------------------SAAEQVNK--------TIIGIDPGSGIMSLTDKAMKDY-DLND--WTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRY----KLKYLDDPKQSYG---SAEE-----------------IHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKV-E-EG----EKPAKV--AAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLK---
31 HHSearch 97.9051% -84 * C5 *2B4L OPUAC_BACSU A:[2-268] ----------------------------------------------------------------------------------------------------------------ENASAAEQVNK--------TIIGIDPGSGIMSLTDKAMKDY-D-LN-DWTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRY----KLKYLDDPKQSYG---SAEE-----------------IHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKV-E-EG----EKPAKV--AAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLKK--
2 PsiBlast_PDB 97.9051% -88 - C5 -2B4M OPUAC_BACSU A:[5-267] -------------------------------------------------------------------------------------------------------------------SAAEQVNK--------TIIGIDPGSGIMSLTDKAMKDY-DLND--WTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRY----KLKYLDDPKQSYG---SAEE-----------------IHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKV-E-EG----EKPAKV--AAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLK---
23 PsiBlast_CBE 96.9551% -91 - C5 -3CHG OPUAC_BACSU A:[11-267] -------------------------------------------------------------------------------------------------------------------------NK--------TIIGIDPGSGIMSLTDKAMKDY-DLND--WTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRY----KLKYLDDPKQSYG---SAEE-----------------IHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKV-E-EG----EKPAKV--AAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLK---
22 PsiBlast_CBE 96.2251% -82 - C5 -3CHG OPUAC_BACSU B:[11-267] -------------------------------------------------------------------------------------------------------------------------NK--------TIIGIDPGSGIMSLTDKAMKDY-DLND--WTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRY----KLKYLDDPKQSYG---SAEE-----------------IHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKV-E-EG----EKPAKV--AAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLK---
21 PsiBlast_CBE 95.3951% -87 - C5 -3CHG OPUAC_BACSU C:[11-267] -------------------------------------------------------------------------------------------------------------------------NK--------TIIGIDPGSGIMSLTDKAMKDY-DLND--WTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRY----KLKYLDDPKQSYG---SAEE-----------------IHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKV-E-EG----EKPAKV--AAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLK---
3 PsiBlast_PDB 94.3651% -84 - C5 -3CHG OPUAC_BACSU D:[12-267] --------------------------------------------------------------------------------------------------------------------------K--------TIIGIDPGSGIMSLTDKAMKDY-DLND--WTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRY----KLKYLDDPKQSYG---SAEE-----------------IHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKV-E-EG----EKPAKV--AAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLK---
5 PsiBlast_PDB 73.9553% -89 - C5 -3L6H ? A:[100-254] ------------------------------------------------------------------------------------------------------------------EDLTNQANK--------TITGIEPGAGVMAASEKTLNSYDNLKD--WKLVPSSSGAMTVALGEAIKQHKDIVITGWSPHWMFNKY----DLKYLADPKGTMG---TSEN-----------------INTIVRKGLKKENPEAYKVLDKFNWTTKDMEAVMLDI-Q-NG----KTPEEA--AKNWIKDHQKEVDKWFK-----------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 70.5953% -81 - C5 -3L6G ? A:[100-255] ------------------------------------------------------------------------------------------------------------------EDLTNQANK--------TITGIEPGAGVMAASEKTLNSYDNLKD--WKLVPSSSGAMTVALGEAIKQHKDIVITGWSPHWMFNKY----DLKYLADPKGTMG---TSEN-----------------INTIVRKGLKKENPEAYKVLDKFNWTTKDMEAVMLDI-Q-NG----KTPEEA--AKNWIKDHQKEVDKWFKG----------------------------------------------------------------------------------------------------------------
52 Fugue 63.9620% -64 - C5 -1R9L PROX_ECOLI A:[1-309] ADLPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQLAAY-ELTN-TVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALP---GDKNADTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQNAIM-H-DGKASEGDIQGH--VDGWIKAHQQQFDGWVNEALA----------------------------------------------------------------------------------------------------------AQK
9 PsiBlast_PDB 63.4130% -67 - C5 -2RF1 - ? A:[143-305] ----------------------------------------------------------------------------------------------------------------------DELDG--------KIYGIEPGNDGNRLIIDMVEKG-TFDLKGFEVVESSEQGMLAQVARAEKSGDPIVFLGWEPHPMNANF----KLTYLSGGDDVFGPNYGGAT-----------------VHTNVRAGYTTECPNVDKLLQNLSFSLQMENEIMGKILN-DG----EDPEKA--AAAWLKDNPQSIEPWLSGVATKDG----------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 63.0330% -65 - C5 -2REG ? A:[116-278] ----------------------------------------------------------------------------------------------------------------------DELDG--------KIYGIEPGNDGNRLIIDMVEKG-TFDLKGFEVVESSEQGMLAQVARAEKSGDPIVFLGWEPHPMNANF----KLTYLSGGDDVFGPNYGGAT-----------------VHTNVRAGYTTECPNVDKLLQNLSFSLQMENEIMGKILN-DG----EDPEKA--AAAWLKDNPQSIEPWLSGVATKDG----------------------------------------------------------------------------------------------------------
26 PsiBlast_CBE 62.0935% -72 - C5 -3TMG ? C:[117-271] ------------------------------------------------------------------------------------------------------------------KGKGDKFKN--------KMIGIDAGAGTQIVTEQALNYY-GLSKE-YELVPSSESVMLASLDSSIKRNEWILVPLWKPHWAFSRY----DIKFLDDPDLIMG---GIES-----------------VHTLVRLGLENDDFDAYYVFDHFYWS-DDLILPLMDK-N-DK----EPGKEYRNAVEFVEKNKEIVKTWV------------------------------------------------------------------------------------------------------------------
25 PsiBlast_CBE 61.9335% -75 - C5 -3TMG ? D:[117-271] ------------------------------------------------------------------------------------------------------------------KGKGDKFKN--------KMIGIDAGAGTQIVTEQALNYY-GLSKE-YELVPSSESVMLASLDSSIKRNEWILVPLWKPHWAFSRY----DIKFLDDPDLIMG---GIES-----------------VHTLVRLGLENDDFDAYYVFDHFYWS-DDLILPLMDK-N-DK----EPGKEYRNAVEFVEKNKEIVKTWV------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 60.9935% -68 - C5 -3TMG ? A:[117-271] ------------------------------------------------------------------------------------------------------------------KGKGDKFKN--------KMIGIDAGAGTQIVTEQALNYY-GLSKE-YELVPSSESVMLASLDSSIKRNEWILVPLWKPHWAFSRY----DIKFLDDPDLIMG---GIES-----------------VHTLVRLGLENDDFDAYYVFDHFYWS-DDLILPLMDK-N-DK----EPGKEYRNAVEFVEKNKEIVKTWV------------------------------------------------------------------------------------------------------------------
27 PsiBlast_CBE 60.9635% -65 - C5 -3TMG ? B:[117-271] ------------------------------------------------------------------------------------------------------------------KGKGDKFKN--------KMIGIDAGAGTQIVTEQALNYY-GLSKE-YELVPSSESVMLASLDSSIKRNEWILVPLWKPHWAFSRY----DIKFLDDPDLIMG---GIES-----------------VHTLVRLGLENDDFDAYYVFDHFYWS-DDLILPLMDK-N-DK----EPGKEYRNAVEFVEKNKEIVKTWV------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 60.6630% -55 - C5 -2RIN ? A:[116-278] ----------------------------------------------------------------------------------------------------------------------DELDG--------KIYGIEPGNDGNRLIIDMVEKG-TFDLKGFEVVESSEQGMLAQVARAEKSGDPIVFLGWEPHPMNANF----KLTYLSGGDDVFGPNYGGAT-----------------VHTNVRAGYTTECPNVDKLLQNLSFSLQMENEIMGKILN-DG----EDPEKA--AAAWLKDNPQSIEPWLSGVATKDG----------------------------------------------------------------------------------------------------------
32 HHSearch 59.2833% -59 - C5 -3TMG ? A:[120-274] ---------------------------------------------------------------------------------------------------------------------GDKFKN--------KMIGIDAGAGTQIVTEQALNYY-G-LSKEYELVPSSESVMLASLDSSIKRNEWILVPLWKPHWAFSRY----DIKFLDDPDLIMG---GIES-----------------VHTLVRLGLENDDFDAYYVFDHFYWSDDLILPLMDKN-DKEP----GKEYRN--AVEFVEKNKEIVKTWVPEK---------------------------------------------------------------------------------------------------------------