@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1325: (2016-03-23 )
MSKVRVYEYAKEHQVSSKKVIEALKDLGIEVANHMSTINENALRQLDNAVDGTNKKAEAPKKETTSNENGNSKGPNKPNMTNSNEKSNKPNKPAGQANKPATANKSQGAKPATNKPANTSNQTQSSGTQQQAGGQKRNNSNRPGGGNSNRPGGNNRPNRGGNFNNKGRNTKKKGKLNHSTVPPTPPKPKELPEKIVFSESLTVAELAKKLYREPSELIKKLFMLGVVATINQSLDKDAIELICDDYGVQVEEEIKVDVTDLDVYFENELNEAVDESKLVERPPVVTIMGHVDHGKTTLLDSLRNTKVTLGEAGGITQHIGAYQLEIHDKKITFLDTPGHAAFTAMRARGAQITDITILVVAADDGVMPQTIEAINHAKAAGMPIIVAVNKIDKPQANPDRVMQELTEYELVPEAWGGDTIFAPISAKFGEGLENLLDMILLVSEVEELKANPDRRAIGSVIEAELDKGRGPVATLLVQDGTLNIGDPIVVGNTFGRVRAMVNDLGRRVKKVGPSTPVEITGLNDVPQAGDRFVVFEDEKTARNIGETRASRALVAQRSATNRVSLDNLFEHMKAGEMKEVNVIIKADVQGSVEALAASLRKIDVEGVNVKIIHTAVGAINESDITLAAASNAIVIGFNVRPTAQAREAAENESVDIRLHRVIYKAIDEIEAAMKGMLDPEFQEKIIGQAQVRQTINVSKVGTIAGCYVTDGKITRDSGVRIIRDGIVVFEGEIATLKRFKDDAKEVAKGYECGITVQNFNDIKEDDVIEAYVMEEIERK

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.....----..230-.......-240.......250.......260.......270.......280.......290.......300.......310.......320..--..---------.------------------..330--------------..---------.-------......340.......350.......360.......370.......380.......390.------.--------------------------..--------------------------.--------------------------..--------------------------400.....--..410--------..------...------...420------.......430.......440..----.---.---...450.......460.......470.......480.......490----.----......500-------...-------.----------...510-........520.........530.......540..--------.....550...-------....--560--------------------...-----.---.------...-.570-....--...580.......590.......600..-.....610.......620.......630----.-........640.......650.......660.......670....---...680-....---.....690-..----......--.---700-.........710.......720...------....730.......740.......750-...--...-.--------760.......770.......---------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MSKVRVYEYAKEHQVSSKKVIEALKDLGIEVANHMSTINENALRQLDNAVDGTNKKAEAPKKETTSNENGNSKGPNKPNMTNSNEKSNKPNKPAGQANKPATANKSQGAKPATNKPANTSNQTQSSGTQQQAGGQKRNNSNRPGGGNSNRPGGNNRPNRGGNFNNKGRNTKKKGKLNHSTVPPTPPKPKELPEKIVFSESLTVAELAKKLYREPSELIKKLFMLGVV----ATINQ-SLDKDAI-ELICDDYGVQVEEEIKVDVTDLDVYFENELNEAVDESKLVERPPVVTIMGHVDHGKTTLLDSLRNTKVTLGEAGGITQHIGAYQL--EI---------H------------------DKK----------------IT---------F-------LDTPGHAAFTAMRARGAQITDITILVVAADDGVMPQTIEAINHAKAAGMPIIVAVNKIDK------P--------------------------QA--------------------------N--------------------------PD--------------------------RVMQELTE--YELV---------PE------AWG------GDTIFA------PISAKFGEGLENLLDMILLVSE----V---E---ELKANPDRRAIGSVIEAELDKGRGPVATLLVQDGTLNIGDPIVVGN----T----FGRVRAMVN-------DLG-------R----------RVKKV--GPSTPVEIT--GLNDVPQAGDRFVVFEDEKTARNI--------GETRASRALVA-------QRSA--T----------------------NRV-----S---L------DNL-FEHM-KAGE--MKEVNVIIKADVQGSVEALAASLRKIDV-EGVNVKIIHTAVGAINESDITLAAAS------N-AIVIGFNVRPTAQAREAAENESVDIRLHRVIYKAIDEIEAAMKGM---LDPE---FQEK---IIGQAQ---VR----QTINVS--K---V---GTIAGCYVTDGKITRDSGVRIIRDG------IVVFEGEIATLKRFKDDAKEVAKGYEC-GIT--VQN-F--------NDIKEDDVIEAYVMEEIERK---------------------------
126 HHSearch 84.7243% -87 - C2 -3J4J - IF2_THET8 A:[3-568] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVRIYQLAKELGMETQELLELLDQMGVA----YKSHASTLEEKDA-EAVRELVKEQRGLQ-----EK--------LAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEV--KT---------P------------------QGT----------------VV---------F-------IDTPGHEAFTTIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDL------P--------------------------QA--------------------------D--------------------------PE--------------------------KVKRQLME--RGFV---------PE------EYG------GDAIVI------PISAKTGQGVQDLLEMILLLAE----L---E---DYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGE----A----YGRIRAMMD-------ADG-------N----------QRKEA--GPGSAVQVL--GFQELPHAGDVVEWVPDLEAAKEI--------AEERKEERKAR-------EEEEKAR----------------------APA-----T---M------AAL-LAAM-AEEG--AKELNLILRADTQGSLEAIQHILARATT-EDVKINILAAQVGAPTESDVLLAQTA------N-AAILAFGVNPPGSVKKKAEEKGVLLKTFRIIYDLVDEVRNMVKGA---REPQ---YKEE---VLGQAE---VR----AIFRLP--T---G---KQVAGCMVTQGRIPRNAEVRVLRDG------QVIWQGRIASLKRFKEDVREVAQGYEC-GIG--LDG-F--------DDFREGDVIEAFQMVE-------------------------------
2 PsiBlast_PDB 83.2642% -87 - C2 -3J4J - IF2_THET8 A:[6-569] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYQLAKELGMETQELLELLDQMGVAYKSHASTLE-EKDAEAVRELVKEQRGLQ-----------------EKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEV--KT---------P------------------QGT----------------VV---------F-------IDTPGHEAFTTIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDL------P--------------------------QA--------------------------D--------------------------PE--------------------------KVKRQLME--RGFV---------PE------EYG------GDAIVI------PISAKTGQGVQDLLEMILLLAE----L---E---DYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGE----A----YGRIRAMMD-------ADG-------N----------QRKEA--GPGSAVQVL--GFQELPHAGDVVEWVPDLEAAKEI--------AEERKEERKAR-------EEEE--K----------------------ARA-----P---A------TMA-ALLA-AMAEEGAKELNLILRADTQGSLEAIQHILARATT-EDVKINILAAQVGAPTESDVLLAQTA------N-AAILAFGVNPPGSVKKKAEEKGVLLKTFRIIYDLVDEVRNMVKGA---REPQ---YKEE---VLGQAE---VR----AIFRLP--T---G---KQVAGCMVTQGRIPRNAEVRVLRDG------QVIWQGRIASLKRFKEDVREVAQGYEC-GIG--LDG-F--------DDFREGDVIEAFQMVEV------------------------------
4 PsiBlast_PDB 74.1840% -85 - C3 -4KJZ IF2_THET8 A:[5-469] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYQLAKELGMECQELLELLDQMGVAYKSHASTLE-EKDAEAVRELVKEQRGLQ-----------------EKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAE------TQHVGAFEV--KT---------P------------------QGT----------------VV---------F-------IDTP-----------GAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDL------P--------------------------QA--------------------------D--------------------------PE--------------------------KVKRQLME--RGFV---------PE------EYG------GDAIVI------PISAKTGQGVQDLLEMILLLAE----L---E---DYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGE----A----YGRIRAMMD-------ADG-------N----------QRKEA--GPGSAVQVL--GFQELPHPGDVVEWVPDLEAAKEI--------AEERKEERKAR-------EEEE--K----------------------ARRPR---T---M------AEL-LRAM-QEEG--RKELNLILRADTQGSLEAIQHILAREST-EDVKINILLAQVGAPTESDVLLAQTA------N-AAILAFGVNPPGSVKKKAEEKGVLLKTFRIIYDLVDEVRNMVKGQ---R------------------------------------------------------------------------------------------------------------------------------------------------------------------------
128 HHSearch 72.9531% -86 - C2 -1G7S IF2P_METTH A:[2-557] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIRSPIVSVLGHVDHGKTTLLDHIRGSAVASR----ITQHIGATEI--PM---------DVIEGICGDFLKKFSIRETLPG----------------LF---------F-------IDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRTPFVVAANKIDR------I--------------------------HG--------------------------W--------------------------RVHEGRPFMETFSKQDIQVQQKLDTKVYELVGKLHE--EGFE---------SERFDRVTDFA------SQVSII------PISAITGEGIPELLTMLMGLAQ----Q---YLREQLKIEEDSPARGTILEVKEETGLGMTIDAVIYDGILRKDDTIAMMTSKDVI----STRIRSLLK-------PRPLESRKKFQ----------KVDEVVAAAGIKIVAP--GIDDV-MAGSPLRVVTDPEKVREE--------ILSEI-------------------------------------------------------------ED-------IKID--TDEAGVVVKADTLGSLEAVVKILRDM------YVPIKVADIGDVSRRDVVNAGIALQEDRVY-GAIIAFNVKVIPSAAQELKNSDIKLFQGNVIYRLMEEYEEWVRGI---EEEKKKKWMEA---IIKPAS---IRLIPKLVFRQS--K-------PAIGGVEVLTGVIRQGYPLM-NDDG------ETV--GTVESMQDKGENLKSASRGQKV-AMA--IKD-AVYG-----KTIHEGDTLYVDIPENH------------------------------
21 PsiBlast_CBE 72.5440% -87 - C3 -4KJZ IF2_THET8 C:[5-473] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYQLAKELGMECQELLELLDQMGVAYKSHASTLE-EKDAEAVRELVKEQRGLQ-----------------EKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEV--KT---------P------------------QGT----------------VV---------F-------IDTPGH----------AKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDL------P--------------------------QA--------------------------D--------------------------PE--------------------------KVKRQLME--RGFV---------PE------EYG------GDAIVI------PISAKTGQGVQDLLEMILLLAE----L---E---DYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGE----A----YGRIRAMMD-------ADG-------N----------QRKEA--GPGSAVQVL--GFQELPHPGDVVEWVPDLEAAKEI--------AEERKEERKAR-------EEEE--K----------------------ARRPR---T---M------AEL-LRAM-QEEG--RKELNLILRADTQGSLEAIQHILARES-----KINILLAQVGAPTESDVLLAQTA------N-AAILAFGVNPPGSVKKKAEEKGVLLKTFRIIYDLVDEVRNMVKGQ---REPQ---Y-----------------------------------------------------------------------------------------------------------------------------------------------------------------
117 Fugue 71.4128% -82 - C2 -1G7S IF2P_METTH A:[1-587] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKIRSPIVSVLGHVDHGKTTLLDHIRGSAV----ASRITQHIGATEIPMDV---------I------------------EGICGDFLKKFSIRETLPGLF---------F-------IDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRTPFVVAANKIDR------IHGWRVHEGRPFMETFSKQDIQVQQKLDT--------------------------K--------------------------VY--------------------------ELVGKLHE--EGFE---------SE------RFDRVTDFASQVSII------PISAITGEGIPELLTMLMGLAQ----QYLRE---QLKIEEDSPARGTILEVKEETGLGMTIDAVIYDGILRKDDTIAMMT----S----KDVISTRIR-------SLL-------K----------PR-----PLESRKKFQ--KVDEVVAAAGIKIVAPGIDDVMA-------------GSPLRVV-------TDPE--K----------------------VRE-----E---I------LSE-IEDI-K-ID--TDEAGVVVKADTLGSLEAVVKILRD------MYVPIKVADIGDVSRRDVVNAGIALQEDRVY-GAIIAFNVKVIPSAAQELKNSDIKLFQGNVIYRLMEEYEEWVRGI---EEEK---KKKWMEAIIKPAS---IR----LIPKLV--F---RQSKPAIGGVEVLTGVIRQGYPLMNDDGE------TV---GTVESMQDKGENLKSASRGQKV-AMA--IKD-AVYG-----KTIHEGDTLYVDIPENHYHILKEQLLTDEELDLMDKIAEIKRKKNPD
6 PsiBlast_PDB 68.8244% -86 - C3 -4B47 IF2_THET8 A:[6-335] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYQLAKELGMETQELLELLDQMGVAYKSHASTLE-EKDAEAVRELVKEQRGLQ-----------------EKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEV--KT---------P------------------QGT----------------VV---------F-------IDTPGHE------QRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDL------P--------------------------QA--------------------------D--------------------------PE--------------------------KVKRQLME--RGFV---------PE------EYG------GDAIVI------PISAKTGQGVQDLLEMILLLAE----L---E---DYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGE----A----YGRIRAMMD-------ADG-------N----------QRKEA--GPGSAVQVL--GFQELPHAGDVVEWVPDLEAAKEI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 68.7244% -89 - C3 -4B44 IF2_THET8 A:[6-335] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYQLAKELGMETQELLELLDQMGVAYKSHASTLE-EKDAEAVRELVKEQRGLQ-----------------EKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEV--KT---------P------------------QGT----------------VV---------F-------IDTPGHEA------RGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDL------P--------------------------QA--------------------------D--------------------------PE--------------------------KVKRQLME--RGFV---------PE------EYG------GDAIVI------PISAKTGQGVQDLLEMILLLAE----L---E---DYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGE----A----YGRIRAMMD-------ADG-------N----------QRKEA--GPGSAVQVL--GFQELPHAGDVVEWVPDLEAAKEI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
125 HHSearch 68.5358% -60 - C2 -1ZO1 - IF2_ECOLI I:[225-724] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRAPVVTIMGHVDHGKTSLLEYIRSTKVASGEAGGITQHIGAYHV--ET---------E------------------NGM----------------IT---------F-------LDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK------P--------------------------EA--------------------------D--------------------------PD--------------------------RVKNELSQ--YGIL---------PE------EWG------GESQFV------HVSAKAGTGIDELLDAILLQAE----V---L---ELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGF----E----YGRVRAMRN-------ELG-------Q----------EVLEA--GPSIPVEIL--GLSGVPAAGDEVTVVRDEKKAREV--------ALYRQGKFREV-------KLAR--Q----------------------QKS-----K---L------ENM-FANM-TEGE--VHEVNIVLKADVQGSVEAISDSLLKLST-DEVKVKIIGSGVGGITETDATLAAAS------N-AILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGM---LSPE---LKQQ---IIGLAE---VR----DVFKSP--K---F---GAIAGCMVTEGVVKRHNPIRVLRDN------VVIYEGELESLRRFKDDVNEVRNGMEC-GIG--VKN-Y--------NDVRTGDVIEVFEIIEIQRT---------------------------
9 PsiBlast_PDB 68.4044% -85 - C3 -4B3X IF2_THET8 A:[6-335] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYQLAKELGMETQELLELLDQMGVAYKSHASTLE-EKDAEAVRELVKEQRGLQ-----------------EKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEGGGITQHVGAFEV--KT---------P------------------QGT----------------VV---------F-------IDTPGHEAFTTIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDL------P--------------------------QA--------------------------D--------------------------PE--------------------------KVKRQLME--RGFV---------PE------EYG------GDAIVI------PISAKTGQGVQDLLEMILLLAE----L---E---DYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGE----A----YGRIRAMMD-------ADG-------N----------QRKEA--GPGSAVQVL--GFQELPHAGDVVEWVPDLEAAKEI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
129 HHSearch 68.2828% -80 - C2 -3WBI - IF2P_YEAST A:[5-575] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDLRSPICCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYF--PI---------DAIKAKTKVMAEYEKQTFDVPG----------------LL---------V-------IDT--------------SLCNIAILVIDIMHGLEQQTIESIKLLRDRKAPFVVALNKIDR------L--------------------------YD--------------------------WKAIPNNSFRDSFAKQSRAVQEEFQSRYS--------------------------KIQLELAE--QGLN---------SE------LYFQNKNMSKYVSIV------PTSAVTGEGVPDLLWLLLELTQ----K---RM--SKQLMYLSHVEATILEVKVVEGFGTTIDVILSNGYLREGDRIVLCGMNGPI----VTNIRALLT-------PQP-------LRELRLKSEYVHHKEV--KAALGVKIAANDLEK-AVSGSRLLVVGPEDDEDEL--------MDDVMD-------------------------------------------------------------DL-TGLL-DSVD--TTGKGVVVQASTLGSLEALLDFLKD------MKIPVMSIGLGPVYKRDVMKASTMLEKAPEY-AVMLCFDVKVDKEAEQYAEQEGIKIFNADVIYHLFDSFTAYQEKL---LEER----RKD---FLDYAIFPCVL----QTLQIINKR---G---PMIIGVDVLEGTLRVGTPICAVKTDPTTKERQTLILGKVISLEINHQPVQEVKKGQTAAGVAVRLED-PSGQQPIWGRHVDENDTLYSLVSRRS------------------------------
7 PsiBlast_PDB 68.1344% -88 - C3 -4B48 IF2_THET8 A:[6-335] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYQLAKELGMETQELLELLDQMGVAYKSHASTLE-EKDAEAVRELVKEQRGLQ-----------------EKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEV--KT---------P------------------QGT----------------VV---------F-------IDTPGHEA------RGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDL------P--------------------------QA--------------------------D--------------------------PE--------------------------KVKRQLME--RGFV---------PE------EYG------GDAIVI------PISAKTGQGVQDLLEMILLLAE----L---E---DYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGE----A----YGRIRAMMD-------ADG-------N----------QRKEA--GPGSAVQVL--GFQELPHAGDVVEWVPDLEAAKEI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 68.0658% -61 - C2 -1ZO1 - IF2_ECOLI I:[226-723] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAPVVTIMGHVDHGKTSLLEYIRSTKVASGEAGGITQHIGAYHV--ET---------E------------------NGM----------------IT---------F-------LDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK------P--------------------------EA--------------------------D--------------------------PD--------------------------RVKNELSQ--YGIL---------PE------EWG------GESQFV------HVSAKAGTGIDELLDAILLQAE----V---L---ELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGF----E----YGRVRAMRN-------ELG-------Q----------EVLEA--GPSIPVEIL--GLSGVPAAGDEVTVVRDEKKAREV--------ALYRQGKFREV-------KLAR--Q----------------------QKS-----K---L------ENM-FANM-TEGE--VHEVNIVLKADVQGSVEAISDSLLKLST-DEVKVKIIGSGVGGITETDATLAAAS------N-AILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGM---LSPE---LKQQ---IIGLAE---VR----DVFKSP--K---F---GAIAGCMVTEGVVKRHNPIRVLRDN------VVIYEGELESLRRFKDDVNEVRNGMEC-GIG--VKN-Y--------NDVRTGDVIEVFEIIEIQR----------------------------
116 Fugue 67.8843% -81 - C3 -4B3X IF2_THET8 A:[1-363] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAKVRIYQLAKELGMETQELLELLDQMGVA----YKSHA-S--------TLEEKDAEAVRELVKEQRGLQEKLAEEERRK-----SLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEGGGITQHVGAFEV--KT---------P------------------QGT----------------VV---------F-------IDTPGHEAFTTIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDL------P--------------------------QA--------------------------D--------------------------PE--------------------------KVKRQLME--RGFV---------PE------EYG------GDAIVI------PISAKTGQGVQDLLEMILLLAE----L---E---DYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGE----A----YGRIRAMMD-------ADG-------N----------QRKEA--GPGSAVQVL--GFQELPHAGDVVEWVPDLEAAKEI--------AEERKEERKAR-------EEEE--K----------------------ARRPR---T---M------AEL-LR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 66.6944% -88 - C3 -4B43 IF2_THET8 A:[6-335] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYQLAKELGMETQELLELLDQMGVAYKSHASTLE-EKDAEAVRELVKEQRGLQ-----------------EKLAEEERRKSLPRRPPVVVIMGHVDHGLTTLLDYLRKSRIAEKEAGGITQHVGAFEV--KT---------P------------------QGT----------------VV---------F-------IDTPGAEA---------KVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDL------P--------------------------QA--------------------------D--------------------------PE--------------------------KVKRQLME--RGFV---------PE------EYG------GDAIVI------PISAKTGQGVQDLLEMILLLAE----L---E---DYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGE----A----YGRIRAMMD-------ADG-------N----------QRKEA--GPGSAVQVL--GFQELPHAGDVVEWVPDLEAAKEI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 65.2729% -82 - C2 -1G7T IF2P_METTH A:[4-474] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSPIVSVLGHVDHGKTTLLDHIRGSAVASR----ITQHIGATEI--PMDVIEGICGDF------------------LKK----------------FSIRETLPGLFF-------IDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRTPFVVAANKIDRIHGWRVH--------------------------EG--------------------------R--------------------------PFMETFSKQDI-----------------QVQQKLDTKVYELVGKLHEEGFESE------RFD------RVTDFASQVSIIPISAITGEGIPELLTMLMGLAQ----QYLRE---QLKIEEDSPARGTILEVKEETGLGMTIDAVIYDGILRKDDTIAMMT----SKDVISTRIRSLLKPRPSR--KKF-------Q----------KVDEV--VAAAGIKIVAPGIDDVMAGSPLRVVTDPEKVREEI---------------------------LSE--I----------------------EDI-----K---I------DT--------------DEAGVVVKADTLGSLEAVVKILRDM------YVPIKVADIGDVSRRDVVNAGIALQEDRVY-GAIIAFNVKVIPSAAQELKNSDIKLFQGNVIYRLMEEYEEWVRGIEEEKKKK---WMEA---IIKPAS---IR------------------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 64.1426% -84 - C2 -4NCL ? A:[9-457] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSPICCILGHVDTGKTKLLDKIRQTNV-----GGITQQIGATYF--PV---------EAIKQKTAVVNK-------DGK----------------FE---------FKVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESLRLLRERKTPFVVALNKIDR------L--------------------------YGWKKIENNGFRESFALQNKAVQNEFRNR--------------------------LD--------------------------QVKLQFAE--QGFN---------SE------LFY------ENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMA--------ELQA--------TVLEVKA----GVTIDVILSNGILREGDRIVLCG----L----EGPIKTNI------------------R----------ALLTP--AP------K--G---------QYIHHKEVKAAQGVKISAPGLEGAIAGSRLLVVGPDDDEEELEE--E----------------------VES-----D---L------QSL-FSRVEKTGK------GVSVQASTLGSLEALLDFLKDCKI-PVANVGIGPVYKRDVMQCGIMLEKAP------DYAVMLCFDVKVDKEAQQYADENGIKIFTADIIYHLFDQFTKHMQEQ---LE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 64.0229% -85 - C2 -1G7S IF2P_METTH A:[4-470] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSPIVSVLGHVDHGKTTLLDHIRGSAVASR----ITQHIGATEI--PMDVIEGICGDF------------------LKK----------------FSIRETLPGLFF-------IDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRTPFVVAANKIDRIHGWRVH--------------------------EG--------------------------R--------------------------PFMETFSKQDI-----------------QVQQKLDTKVYELVGKLHEEGFESE------RFD------RVTDFASQVSIIPISAITGEGIPELLTMLMGLAQ----QYLRE---QLKIEEDSPARGTILEVKEETGLGMTIDAVIYDGILRKDDTIAMMT----SKDVISTRIRSLLKPRPLESRKKF-------Q----------KVDEV--VAAAGIKIVAPGIDDVMAGSPLRVVTDPEKVREEI---------------------------LSE--I----------------------EDI-----K---I------DT--------------DEAGVVVKADTLGSLEAVVKILRDM------YVPIKVADIGDVSRRDVVNAGIALQEDRVY-GAIIAFNVKVIPSAAQELKNSDIKLFQGNVIYRLMEEYEEWVRGIEEEKKKK---WMEA---IIKPAS---IR------------------------------------------------------------------------------------------------------------------------------------------------
127 HHSearch 63.4943% -51 - C4 -3IZY - IF2M_BOVIN P:[178-713] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRSPVVTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLV--SL---------PS-----------------GEK----------------IT---------F-------LDTPGHAAFSAMRARGTQVTDIVILVVAADDGVMKQTVESIQHAKDAHVPIVLAINKCDK------A--------------------------EA--------------------------D--------------------------PE--------------------------KVKKELLA--YDVV---------CE------DYG------GDVQAV------HVSALTGENMMALAEATIALAE----M---L---ELKADPTGAVEGTVIESFTDKGRGPVTTAIIQRGTLRKGSILVAGK----S----WAKVRLMFD-------ENG-------R----------AVNEA--YPSMPVGII--GWRDLPSAGDEILEVESEPRAREV--------VDWRKYEQEQE-------KNKE--DLKLIEEKRKEHQEAHRKDREKYGTVHWKERSYIKYREKRQQQPLKPKEK-LERD--SNVLPVIVKGDVDGSVEAILNVMDTYDASHECELDLVHFGVGDISENDVNLAETF------H-GVIYGFNVNAGNVIQQLAAKKGVKIKLHKIIYRLIEDLQEELSSR---LPCI---VEEH---PIGEAS---IL----ATFSIT--EGKKK---VPVAGCRVQKGQIEKQKKFKLIRNG------HVIWKGSLISLKHHKDDTSVVKTGMDC-GLS--LDEEK--------IEFKVGDAIICYE----------------------------------
5 PsiBlast_PDB 61.5980%-102 - C3 -2LKC - A:[2-178] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHMVERPPVVTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQV--TV---------N------------------DKK----------------IT---------F-------LDTPGHEAFTTMRARGAQVTDIVILVVAADDGVMPQTVEAINHAKAANVPIIVAINKMDK------P--------------------------EA--------------------------N--------------------------PD--------------------------RVMQELME--YNLV---------PE------EWG------GDTIFC------KLSAKTKEGLDHLLEMILLVSE----M---E---ELKANP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------