@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Lmo1337: (2016-03-23 )
LSFQEQYVFWRLTNYFLGVEKYRLIHLHEEKQELWLENTSQKKRPVIRIQMKELSWANVVERDVTHTLHVTENLRKQMGRLKLPLVNIYITPFEPMGDISPFFGQSIASPNEKVKLENILLANEQMREHLDILIKTLELPEEAFVLPNEITKELVAKEREQVIAYITTKVNEEQKVARNSKPIVTYTFIGLLVAAFLWLSFQGGTTNSFNLIKWGGKFNPLIYAGEWWRFISPIFLHSGLMHIASNAVMLYIVGAWAERIYGKWRYVLILLLGGICGNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQFFHWRRLAYGISLFAVAVLFLYFGYQKGEQPYDPMQANVAVQQYLQEQNKKEATKITDNLISSGSADGYSYTYAASIALQDKQIDKAETMAKEAINIDKDIPEAHYYLSVCYRIKGDMPNAIKEANSARELSSNPFFDSYYDELEKIKE
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------.........----10........20........30........40........50........60.-------------------.......70........80-........90........100.-......110...---....120.......130....---------...140.......150.....-..160......-..170.......180------........190....-------.------------------..200....--------...210...-....220.......230-.......240.....---------..250.-.....----.260--------........270.-......280.......290-.........300-----...--......310-.--.--------------......320....---.----..330.........340.......350-----------------------------------.....---------...360.......370.......380.......390------------........400.......410..--.....420-.....--....430.......440....----------...450.......460---.......470.......480-........490....------...500-----------........510-----------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------LSFQ
E
Q
Y
V
F
----
W
R
L
T
N
Y
F
LGV
E
K
Y
R
L
I
H
L
H
E
E
K
Q
E
L
W
L
ENTSQKKR
P
V
I
R
I
Q
MKEL
S
W
A
N
V
V
E
R
-------------------DV
T
H
T
L
H
V
T
E
N
L
R
K
Q
MGRL-KL
P
L
V
N
I
Y
I
TPFEPMGDI
S
P
F
F
-
G
Q
SIASPN
E
K
V
K
---
L
E
N
ILL
A
N
E
Q
M
R
E
H
L
D
I
L
I
K
T
---------LEL
P
E
E
AFV
L
P
N
E
I
T
K
E
L
V
A
K
-
E
R
E
Q
-
V
I
A
Y
I
T-TKVN
E
E
Q
K
VARNSK-------
P
I
V
T
Y
T
F
I
G
L
L
V
A
A
F
-------
L
------------------
W
L
S
FQGGTT--------NS
F
N
L
I
K
WG-GKFN
P
L
I
YA
G
E
W
W
R
F
I
S
-
P
I
F
L
H
S
G
L
M
H
IASN
A
---------
V
M
L
Y
I
V
-
G
A
W
A
E
----
R
I
Y
---------
G
K
W
R
Y
V
L
I
L
L
L
G
-
G
I
C
G
N
I
A
S
F
A
L
N
M
N
LSV---G
A
S
T
A
V
F
A
V
M
-------
G
A
L
--
L
Y
L
V
V
LKP--N--
L
--------------
Y
A
K
T
I
G
V
S
I
A
S
L
V
---
A
----
I
N
L
--
L
I
D
V
F
SSQID
I
A
G
H
I
G
G
L
V
G
G
------------------------------------
F
L
L
A
G
---------
A
L
SL
P
K
Q
F
F
H
W
R
R
L
A
Y
G
I
S
L
F
A
V
A
V
L
F
L
Y
F
GYQKG-------------EQPYD
P
M
Q
A
N
V
A
V
Q
Q
Y
L
Q
E
QNK
K
--
E
A
T
K
I
T
---
D
N
L
IS--SGSADG
Y
S
Y
T
Y
A
A
S
I
A
L
QDKQ----------I
D
K
A
E
T
M
A
K
E
AINIDK---DIP
E
A
H
Y
Y
L
S
V
C
Y
R
IKGDM--
P
N
A
I
K
E
A
N
S
A
RELSS------NP
F
F
D
------------
S
Y
Y
D
E
L
E
K
IKE-----------------------
43
Fugue
69.33
21%
-118
- C3 -
2IC8
12
GLPG_ECOLI
A:
[1-182]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
R
A
-------
G
P
V
T
W
V
M
M
I
A
C
V
V
V
F
-------
I
------------------
A
M
Q
I
L
G
------------
D
Q
E
V
M
L
W
L
-
A
W
P
F
D
P
T
L
K
F
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
--
Q
SG
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
F
---------
V
D
S
L
N
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
65.81
21%
-115
- C3 -
2XOV
19
GLPG_ECOLI
A:
[2-180]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
A
-------
G
P
V
T
W
V
M
M
I
A
C
V
V
V
F
-------
I
------------------
A
M
Q
I
L
G
D
Q
------------
E
V
M
L
W
L
-
A
W
P
F
D
P
T
L
K
F
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
--
Q
--
S
--------------
G
I
Y
L
Q
R
-
G
L
I
I
F
A
L
I
W
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
F
---------
V
D
S
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
Fugue
61.06
21%
-115
- C3 -
3B44
17
GLPG_ECOLI
A:
[1-180]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
R
A
-------
G
P
V
T
W
V
M
M
I
A
C
V
V
V
F
-------
I
------------------
A
M
Q
I
L
G
------------
D
Q
E
V
M
L
W
L
-
A
W
P
F
D
P
T
L
K
F
E
F
A
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
--
Q
SG
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
F
---------
V
D
S
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48
Fugue
60.98
15%
-49
* C4 *
1DIO
3
?
A:
[1-551]
---------------------------------------------------------------------------------------------------------------------
M
R
S
K
R
F
E
A
L
A
K
RP
V
N
Q
D
G
F
V
K
E
W
I
E
E
G
F
I
A
M
E
S
P
N
D
P
K
--
P
S
I
K
I
V
N
G
A
V
T
E
L
D
G
K
P
V
S
D
F
D
L
I
D
H
-------------------
F
I
A
R
Y
G
I
N
L
N
R
A
E
E
V
M
A
M
D
-
S
V
K
L
A
N
M
L
C
D
P
N
V
K
R
S
E
I
V
P
L
T
T
A
M
T
P
A
K
I
V
E
V
V
S
H
MN
V
V
E
M
M
M
A
M
Q
K
M
R
A
R
R
T
P
S
Q
Q
A
H
V
T
N
VKDN
P
V
Q
I
A
A
D
A
A
E
G
A
W
R
G
F
D
E
Q
E
T
T
V
A
V
A
R
-
Y
A
P
F
N
A
-
I
A
L
L
V
G
S
Q
V
G
R
P
G
-----------
V
L
T
Q
C
S
L
E
E
A
T
E
-------
L
------------------
K
L
G
M
L
G
H
T
C
--------
Y
A
E
T
I
S
V
Y
G
-
T
--
E
P
V
F
T
D
G
D
D
----
T
-
P
W
S
K
G
F
L
A
S
S
Y
A
S
R
G
---------
L
K
M
R
F
T
S
G
S
G
S
E
----
V
Q
M
---------
G
Y
A
E
G
K
S
M
L
Y
L
E
-
A
R
C
I
Y
I
T
K
A
A
G
V
Q
G
L
Q
N
---
G
S
V
S
C
I
-
G
V
P
-------
S
A
V
PS
G
I
R
A
V
L
A
E
--
N
--
L
--------------
I
C
S
S
L
D
L
E
C
A
S
S
N
---
D
----
Q
T
F
-----
T
H
S
D
M
R
R
T
A
R
L
L
M
Q
F
L
P
G
TD----------------------------------
F
I
S
S
G
---------
Y
S
A
V
P
N
Y
D
N
M
F
-----
A
G
S
N
E
D
A
E
D
F
D
D
Y
N
V
I
Q
R
D
L
KVDGG
L
R
P
V
R
E
E
D
V
I
A
I
R
N
K
A
A
R
A
L
Q
A
V
F
A
G
M
G
L
P
--
P
I
T
D
E
E
---
V
E
A
A
T
Y
A
H
G
S
K
D
M
P
E
R
N
I
V
E
D
I
K
F
A
Q
E
I
----------
I
N
K
N
R
N
G
L
E
V
V
K
A
L
A
Q
G
GF
T
D
V
A
Q
D
M
L
N
I
Q
K
A
K
L
T
G
D
Y
LH
T
S
A
I
I
V
G
D
G
Q
V
L
S
A
V
------
N
D
V
N
D
YAGPAT
G
Y
R
L
Q
G
E
R
W
E
E
I
K
N
I
P
G
ALDPN------------------
50
Fugue
58.91
12%
-81
- C1 -
2PGG
-
RDRP_IBDV
A:
[31-804]
LLIP
K
V
W
V
P
P
EDPLAS
P
S
R
L
A
K
F
L
R
E
N
G
Y
K
V
L
Q
P
R
S
L
P
E
N
E
E
Y
E
T
D
Q
I
L
PDL
A
W
M
R
Q
I
EGAVLKP
T
L
S
L
PIGD
Q
E
Y
F
P
K
Y
Y
P
T
H
R
PSKEKPNAYPPD
I
A
L
L
K
Q
M
I
Y
L
F
L
Q
VPEAN
E
G
L
K
D
E
V
T
L
L
T
----
Q
N
I
R
D
K
A
Y
G
-
S
G
T
Y
M
G
Q
A
T
R
L
V
A
M
K
E
V
A
T
G
R
N
P
N
K
D
P
L
K
L
G
Y
T
F
E
S
I
A
Q
L
L
D
I
T
L
P
V
G
P
P
GEDD
K
P
W
V
P
LTR
V
P
S
R
M
L
V
L
T
G
D
V
D
G
D
F
E
V
E
D
Y
L
P
----
K
I
N
L
K
S
S
S
G
--
L
P
Y
V
-
G
R
T
----
K
G
E
T
I
---
G
E
M
I
A
I
S
N
Q
F
L
R
E
L
S
T
L
L
K
Q
G
---------
A
G
T
K
G
S
----
N
K
K
K
L
L
S
M
L
S
D
-
Y
W
Y
L
-
S
C
G
L
L
F
-
P
K
A
E
R
Y
D
K
S
T
W
L
T
K
T
R
N
I
WSA
P
S
P
T
H
L
M
I
S
M
I
T
W
P
V
-------
M
S
N
SPNNVLNIEGCPSLYK
F
N
P
F
R
G
G
L
N
--------
R
I
V
E
W
I
L
A
P
-
E
E
P
K
A
L
V
Y
A
D
N
I
Y
I
V
H
S
-
N
T
W
Y
S
I
D
L
E
K
G
E
A
N
C
T
R
Q
H
M
Q
A
A
-
M
Y
Y
I
L
T
-
R
G
W
S
D
NGDP
M
F
N
---------
Q
T
W
A
T
F
A
M
N
I
A
P
-
A
L
V
V
D
S
S
C
L
I
M
N
L
Q
I
K
T
Y
G
Q
G
S
G
N
A
A
T
F
I
N
-------
N
H
L
--
L
S
T
L
V
L
D
Q
--
W
--
N
L
M
RQPRPDS
E
E
F
K
S
I
E
D
K
L
G
I
N
F
K
I
E
R
---
S
----
I
D
D
--
I
R
G
K
L
R
Q
L
V
L
L
A
-
Q
P
G
Y
L
S
G
G
VEPEQSSPTVELDLLG
W
S
A
T
Y
S
KDLG
I
Y
V
P
V
LD
K
E
R
L
F
C
S
A
---------
A
Y
P
K
G
V
G
I
E
Q
A
Y
K
V
V
R
Y
E
A
L
R
L
V
G
G
W
N
Y
P
L
L
N
K
A
C
-------------
K
N
N
A
G
A
A
R
R
H
L
E
A
K
G
F
P
L
D
E
F
L
A
--
E
W
S
E
L
S
EFG
E
A
F
E
G
--
F
N
I
K
L
T
V
T
S
E
S
L
A
E
L
N
K
P
V
P
P
K
P
P
N
V
N
R
PVN
T
G
G
L
K
A
V
S
N
A
L
K
T
G
R
Y
---
R
N
E
A
G
L
S
G
L
V
L
L
A
T
A
R
S
R
L
--
Q
D
A
V
K
A
K
A
E
A
E
K
L
H
K
SKPDDP
D
A
D
W
F
------------
E
R
S
E
T
L
S
D
L
L
E
K
A
DIASKVAHS
A
L
V
E
T
S
D
A
L
E
AV
2
PsiBlast_PDB
58.58
23%
-116
- C3 -
4QO0
4
?
A:
[48-179]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
58.15
27%
-127
- C3 -
2NR9
4
GLPG_HAEIN
A:
[49-178]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
V
W
R
Y
I
S
-
H
T
L
V
H
L
S
N
L
H
I
L
F
N
L
---------
S
W
F
F
I
F
-
G
G
M
I
E
----
R
T
F
---------
G
S
V
K
L
L
M
L
Y
V
V
A
S
A
I
T
G
Y
V
Q
N
Y
V
S
G
P
A
F
-
F
---
G
L
S
G
V
V
Y
A
V
L
-------
G
Y
V
--
F
I
R
D
K
L
N
H
--
H
--
L
--------------
F
D
L
P
E
G
F
F
T
M
L
L
V
---
G
----
I
A
L
G
F
I
S
P
L
F
G
V
E
M
G
N
A
A
H
I
S
G
L
I
V
G
------------------------------------
L
I
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
57.96
23%
-108
- C3 -
2XOV
14
GLPG_ECOLI
A:
[44-175]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
57.66
23%
-113
- C3 -
3B45
11
GLPG_ECOLI
A:
[44-175]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
57.45
19%
-110
- C3 -
2NR9
5
GLPG_HAEIN
A:
[4-189]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
L
A
Q
Q
-------
G
K
I
T
L
I
L
T
A
L
C
V
L
I
Y
-------
I
------------------
A
Q
Q
L
G
F
E
D
---------
D
I
M
Y
L
---
M
-
H
Y
P
A
Y
E
E
Q
D
S
E
V
W
R
Y
I
S
-
H
T
L
V
H
L
S
N
L
H
I
L
F
N
L
---------
S
W
F
F
I
F
-
G
G
M
I
E
----
R
T
F
---------
G
S
V
K
L
L
M
L
Y
V
V
A
-
S
A
I
T
G
Y
V
Q
N
Y
V
S
G
P
A
F
F
---
G
L
S
G
V
V
Y
A
V
L
-------
G
Y
V
--
F
I
R
D
K
L
N
H
--
H
--
L
--------------
F
D
--
L
P
E
G
F
F
T
M
L
---
L
V
G
I
A
L
G
F
--
I
S
P
L
F
G
V
E
M
G
N
A
A
H
I
S
G
L
I
V
G
------------------------------------
L
I
W
G
F
---------
I
D
S
K
L
R
K
N
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
57.19
23%
-116
- C3 -
4QO2
10
?
A:
[48-179]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
57.09
23%
-124
- C3 -
2XOW
12
GLPG_ECOLI
A:
[43-174]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
57.05
23%
-112
- C3 -
4NJP
-
GLPG_ECOLI
A:
[69-200]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
56.76
23%
-117
- C3 -
4QNZ
3
?
A:
[48-179]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
I
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
56.36
23%
-114
- C3 -
2IC8
10
GLPG_ECOLI
A:
[44-175]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
56.23
23%
-118
- C3 -
3ZEB
6
GLPG_ECOLI
A:
[43-174]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
Fugue
55.96
17%
-64
- C2 -
4IMP
1
?
A:
[31-550]
----------------------------------------------------------------------------------------------------------------------
S
D
P
A
A
G
W
F
----
W
Q
A
V
A
R
Q
---------
D
L
K
S
V
S
D
A
L
D
L
D
A
D
A
P
-----
L
S
A
T
L
P
A
L
S
V
W
H
R
Q
E
R
-------------------
E
R
V
L
A
D
G
W
---------
R
Y
-
R
V
D
W
V
R
V
A
P
Q
P
V
R
R
T
R
E
------
T
W
L
L
V
V
P
P
G
G
I
E
---
E
A
L
V
E
R
L
T
D
A
L
N
T
R
-
G
I
S
T
L
R
---------
L
D
V
P
P
A
A
T
--
S
G
E
L
A
T
E
L
R
A
A
-
A
D
G
D
P
V
K
A
I
L
S
L
T
A
L
D
E
R
P
H
P
E
C
K
D
V
-------
P
S
G
I
A
L
L
L
N
L
V
K
A
L
G
E
A
DLR
I
P
L
------------------
W
T
I
T
R
G
A
V
K
AGPADRLL
R
P
M
Q
A
Q
A
W
G
L
G
R
V
A
A
L
E
H
P
E
R
W
G
G
L
I
D
L
P
D
S
L
D
G
D
V
L
T
R
L
G
E
A
L
T
NGLAED
Q
L
A
I
R
Q
S
-
G
V
L
A
R
----
R
L
V
P
A
P
ANQPAG
R
K
W
R
P
R
G
S
A
L
I
T
-
G
G
L
G
A
V
G
A
Q
V
A
R
W
L
A
E
I
---
G
A
E
R
I
V
L
T
S
R
RGNQAAG
A
A
E
--
L
E
A
E
L
R
A
L
--
G
--
A
--------------
Q
V
S
I
V
A
C
D
V
T
D
R
A
---
E
----
M
S
A
--
L
L
A
E
F
--
D
V
T
A
V
F
H
A
A
G
V
G
R
L
------------------------------------
L
P
L
A
E
TD
Q
N
G
L
A
E
I
C
A
A
K
V
R
G
A
Q
V
L
D
E
L
C
D
S
T
D
L
D
A
F
V
L
F
S
S
G
A
G
V
W
G
G
-------------
G
G
Q
G
A
Y
G
A
A
N
A
F
L
D
T
L
A
E
Q
R
R
A
R
G
L
P
A
T
S
I
S
W
--
G
S
W
A
G
--
G
G
M
A
D
G
A
A
G
E
H
L
R
R
R
G
I
R
P
M
P
----------
A
A
S
A
I
L
A
L
Q
E
V
L
D
Q
D
E
---
T
------
C
V
S
I
A
D
V
---
D
W
--
D
R
F
V
P
T
F
A
A
T
R
A
-------------
T
------------
R
L
F
D
E
V
P
A
A
R
K
AM---------------------
10
PsiBlast_PDB
55.62
23%
-119
- C3 -
3UBB
1
GLPG_ECOLI
A:
[44-175]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
55.43
23%
-109
- C3 -
4NJN
-
GLPG_ECOLI
A:
[69-200]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
54.73
23%
-107
- C3 -
3ZMH
6
GLPG_ECOLI
A:
[44-175]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
F
W
R
Y
F
T
-
H
A
L
M
H
F
S
L
M
H
I
L
F
N
L
---------
L
W
W
W
Y
L
-
G
G
A
V
E
----
K
R
L
---------
G
S
G
K
L
I
V
I
T
L
I
S
-
A
L
L
S
G
Y
V
Q
Q
K
F
S
G
P
W
F
G
---
G
L
S
G
V
V
Y
A
L
M
-------
G
Y
V
--
W
L
R
G
E
R
D
P
QS
G
--
I
--------------
Y
L
Q
R
G
L
I
I
F
A
L
I
W
---
I
----
V
A
G
--
W
F
D
L
F
G
M
S
M
A
N
G
A
H
I
A
G
L
A
V
G
------------------------------------
L
A
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------