@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1703: (2016-03-27 )
MNQNPVEEGQKFPLTIRRMGINGEGIGYFKKAVVFVPGAITGEEVVVEAVKVRDRFTEAKLNKIRKKSPNRVTAPCPVYEACGGCQLQHVAYSAQLELKRDIVIQSIEKHTKIDPTKLKIRPTIGMEDPWRYRNKSQFQTRMVGSGQVETGLFGANSHQLVPIEDCIVQQPVTIKVTNFVRDLLEKYGVPIYDEKAGSGIVRTIVVRTGVKTGETQLVFITNSKKLPKKREMLAEIEAALPEVTSIMQNVNQAKSSLIFGDETFLLAGKESIEEKLMELEFDLSARAFFQLNPFQTERLYQEVEKALVLTGSETLVDAYCGVGTIGQAFAGKVKEVRGMDIIPESIEDAKRNAEKNGIENVYYEVGKAEDVLPKWVKEGFRPDAVIVDPPRSGCDQGLIKSLLDVEAKQLVYVSCNPSTLARDLALLAKKYRIRYMQPVDMFPQTAHVETVVLLQLKDK

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.....----------..140.-.-...-..150.......160..--------.....170.......180.......190.......200........-------210.......220....-...230...-....240..-.....250........260.......270-..-.....----.--------.280.......290..----------------...-..300...-.....-310..-......320.......330-.---.-.....340.......350.....-..--360.-........370..-.--.------------..----------.380.......390-----------.....------------.---.-.400.-.--------.....-.410----...-----....420---....-....---.------430....------..-.-------------440----........450.......-------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MNQNPVEEGQKFPLTIRRMGINGEGIGYFKKAVVFVPGAITGEEVVVEAVKVRDRFTEAKLNKIRKKSPNRVTAPCPVYEACGGCQLQHVAYSAQLELKRDIVIQSIEKHTKIDPTKLKIRPTIGMEDPWRYRNKSQ----------FQTRMV-G-SGQ-VETGLFGANSHQLVPIE--------DCIVQQPVTIKVTNFVRDLLEKYGVPIYDEKAGSGI-VRTIVVRTG-------VKTGETQLVFITNSKKL-PKKREMLAE-IEAALPEVT-SIMQNV-NQAKSSLIFGDETFLLAGKE---SI-EEKLM----E--------LEFDLSARAFFQLNPF----------------QTE-RLYQ-EVE-KALVL-T-GSE-TLVDAYCGVGTIGQAFAGK-V---K-EVRGMDIIPESIEDAKRNAEKNG-IE--N--V-YYEVGKAEDVLPK-W--V------------KE----------GFRPDAVIVDPPR------------SGCDQ------------G---L-IK-SL-L--------DVEAK-QLVY----VSC-----NPSTL-----ARDL-ALLA---K------KYRIRYM------QP-V-------------DM-----FPQTAHVETVVLLQLKDK-------------------------
2 PsiBlast_PDB 90.6826% -67 * C1 *1UWV RLMD_ECOLI A:[28-429] ----------------------GQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQ-QRSKSAALARLMKHDVSE---------VIADVPWGYRRRAR----------LSLNYLPK-TQQ-LQMGFRKAGSSDIVDVK--------QCPILAPQLEALLPKVRACL------------GS--------LQAM-------RHLGHVELVQATSG---------TLMI-LRHTAPLSS-ADREKL-ERFSHS--EGLDLYLAPDSE---IL-ETVSG----EMPWYDSNGLRLTFSPRDFIQVNAG----------------VNQ-KMVA-RAL-EWLDV-Q-PED-RVLDLFCGMGNFTLPLATQ-A---A-SVVGVEGVPALVEKGQQNARLNG-LQ--N--VTFYHENLEEDVTKQPW--A------------KN----------GF--DKVLLDPAR------------AGA-A------------G---V-MQ-QI-I--------KLEPI-RIVY----VSC-----NPATL-----ARDSEALLK---A------GYTIARL------AM-L-------------DM-----FPHTGHLESMVLF------------------------------
1 PsiBlast_PDB 87.8726% -61 - C1 -2BH2 RLMD_ECOLI A:[28-429] ----------------------GQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQ-QRSKSAALARLMKHDVSE---------VIADVPWGYRRRAR----------LSLNYLPK-TQQ-LQMGFRKAGSSDIVDVK--------QCPILAPQLEALLPKVRACL------------GS--------LQAM-------RHLGHVELVQATSGT---------LMI-LRHTAPLSS-ADREKL-ERFSHS--EGLDLYLAPDSE---IL-ETVSG----EMPWYDSNGLRLTFSPRDFIQVNAG----------------VNQ-KMVA-RAL-EWLDV-Q-PED-RVLDLFCGMGNFTLPLATQ-A---A-SVVGVEGVPALVEKGQQNARLNG-LQ--N--VTFYHENLEEDVTKQPW--A------------KN----------GF--DKVLLDPAR------------AGA-A------------G---V-MQ-QI-I--------KLEPI-RIVY----VSC-----NPATL-----ARDSEALLK---A------GYTIARL------AM-L-------------DM-----FPHTGHLESMVLF------------------------------
49 HHSearch 82.1124% 8 - C- -1UWV RLMD_ECOLI A:[15-432] ---------QIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHD---------VSEV-IADVPWGYRRRAR----------LSLNYL-PKTQQ-LQMGFRKAGSSDIVDVK--------QCPILAPQLEALLPKVRACLGSLQ-----AMRHLG----HVELVQA--------TSGTLMILRHTAPLS--SADREKLER-F----SHSE-GLDLYL-APDS------EILETVSGEM---PW-Y-DSN----G--------LRLTFSPRDFIQVNAG----------------VNQ-KMVA-RAL-EWLDV-Q-PED-RVLDLFCGMGNFTLPLATQ-A---A-SVVGVEGVPALVEKGQQNARLNG-LQ--N--V-TFYHENLEEDVTK-Q--P------------WA----------KNGFDKVLLDPAR------------AGAAG----------------V-MQ-QI-I--------KLEPI-RIVY----VSC-----NPATL-----ARDS-EALLK--A------GYTIARL------AM-L-------------DM-----FPHTGHLESMVLFSRV---------------------------
50 HHSearch 72.5220% -49 - C1 -3BT7 TRMA_ECOLI A:[3-369] --------------------------------------------------------------------------------HMTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDL------VPEVFRS-PVSHYRMRAE----------FRIWHD-G-DDL-YHIIFDQ-QTKSRIRVD--------SFPAASELINQLMTAMIAGVRNNPVL-------RHK-LFQIDYLTT--------LSNQAVVSLLYHKKLD-DEWRQEAEA-LRDALRAQNLNVHLIG-R--------ATKTKIELDQD---YI-DERLPVAGKE--------MIYRQVENSFTQPNAA----------------MNI-QMLE-WAL-DVTKG---SKG-DLLELYCGNGNFSLALARN-F---D-RVLATEIAKPSVAAAQYNIAANH-ID--N--V-QIIRMAAEEFTQA-M--NGVREFNRLQGIDLK----------SYQCETIFVDPPR------------SGLDS------------E---T-EK-MV-----------QAYP-RILY----ISC-----NPETL-----CKNL-ETLS---Q------THKVERL------AL-F-------------DQ-----FPYTHHMQCGVLLTAK---------------------------
72 Fugue 71.1319% -43 - C1 -3BT7 TRMA_ECOLI A:[1-369] --------GSHMTPE----------------------------------------------------------------------HLPTEQYEAQLAEKVVRLQSMMAPFSDLVP-------EVFRSPVSHYRMRAE----------FRIWHD-G--DD-LYHIIFDQQTKSRIRVD--------SFPAASELINQLMTAMIAGVRN------NPVLRHKL-FQIDYLTT---------LSNQAVVSLLYHKKLD-DEWRQEAEA-LRDALRAQN-LNVHLI-GRATKTKIELDQD---YIDE---RL-PVAGK----E--------MIYRQVENSFTQPNAA----------------MNI-QMLE-WAL-DVTKG-S-K-G-DLLELYCGNGNFSLALARN-F---D-RVLATEIAKPSVAAAQYNIAANH-ID--N--V-QIIRMAAEEFTQA-M--NGVREFNRLQGIDLK----------SYQCETIFVDPPR------------SGLDS------------E---T-EK-MV-Q--------AYP---RILY----ISC-----NPETL-----CKNL-ETLS---Q------THKVERL------AL-F-------------DQ-----FPYTHHMQCGVLLTAK---------------------------
3 PsiBlast_PDB 66.5930% -45 - C1 -3BT7 TRMA_ECOLI A:[170-369] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDERLPVAGKE---MI-YRQV--------------------ENSFTQPNAA----------------MN----IQ-MLE-WALDV-TKGSKGDLLELYCGNGNFSLALARN-F---D-RVLATEIAKPSVAAAQYNIAANH-ID--N--V-QIIRMAAEEFTQA-MNGV------------REFNRLQGIDLKSYQCETIFVDPPR------------SGLDS------------E---T-EK-M------------VQAYPRILY----ISC-----NPETL-----CKNL-ETLS---Q------THKVERL------AL-F-------------DQ-----FPYTHHMQCGVLLTAK---------------------------
74 Fugue 59.8514% -33 - C1 -2CWW ? A:[1-382] ---------------------------------------------------MRIQVNAKGAARLLSRHL-----------------------------------------------------WVFRRDVVSGPETPG----------LYPVYW-G-RRF-LALALYNPHTDLAVRAY--------RFAPAEDPVAALLENLAQALARREAVLRQDP--EGG-YRLVHAEGDLLPGLVVDYYAGHAVVQATAHAWE-GLLPQVAEA-LRPHVQSVL-AKNDAR-TRELEGLPLYVRPLLGEVPE---RV-QVQEG----R--------VRYLVDLGAYLDQREN----------------RLY-MER------------F-RGE-RALDVFSYAGGFALHLALG-F---R-EVVAVDSSAEALRRAEENARLNG-LG--N--V-RVLEANAFDLLRR-L--E------------KE----------GERFDLVVLDPPAFAKGKKDVERAYRAYKE------------V---N-LR-AI-K--------LLKEG-GILA----TASCSHHMTEPLF-----YAMV-AEAA---QDAHRLLRVVEKRG------QP-F-------------DHPVLLNHPETHYLKFAVFQVL----------------------------
57 HHSearch 58.3617% -58 - C1 -3V97 RLMKL_ECOLI A:[502-702] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L-EVTEY----N--------AHLWVNLTDYLDTGLF----------------LDH-RIARRMLG-QMS-----KGK-DFLNLFSYTGSATVHAGLG-GA--R-STTTVDMSRTYLEWAERNLRLNG-LTGRA--H-RLIQADCLAWLRE-A---------------------------NEQFDLIFIDPPT------------FS---AFDVQRDHL---A---L-MK-DLKR--------LLRAG-GTIM----FSN-----NKRGF-----RMDL-DGLA---KL-----GLKAQEITQKT--LS-Q-------------D------FARNRQIHNCWLITA----------------------------
65 HHSearch 56.6621% -62 - C1 -2PWY TRMI_THET2 A:[87-256] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMV-TLLDL-A-PGM-RVLEAGTGSGGLTLFLARA-VGEKG-LVESYEARPHHLAQAERNVRAFWQVE--N--V-RFHLGKLEEAELE-----------------------------EAAYDGVALDLME------------P--W-------------K---V-LE-KAAL--------ALKPD-RFLV----AYL-----PNITQ-----VLELVRAAE---AH-----PFRLERV------LE-VGWREWEVRLPVAHPR-----FQQVGHTAFLVALRRWK--------------------------
54 HHSearch 54.4119% -55 - C1 -2YX1 TRM5B_METJA A:[149-335] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEHLAGENR--TLTIHKEN----G--------YRLWVDIAKVYFSPRL----------------GGE-R--A-RIM-KKVS----LND-VVVDMFAGVGPFSIACKN--A---K-KIYAIDINPHAIELLKKNIKLNK-LEH-K--I-IPILSDVREVD--------------------------------VKGNRVIMNLPK------------FAH--------------K---F-IDKAL-D--------IVEEG-GVIH----YYT-----IGKDF-----DKAI-KLFE---KKC----DCEVLEK------RIVK-------------SY-----APREYILALDFKINK----------------------------
51 HHSearch 53.6315% -37 - C1 -3VSE ? A:[14-376] ---------------------------------------------------------------------------------------------------------------------------YFNGYPLIEEEDIYSQDHLKEGDIFQIVTD---KSQYVATAYVGRQHKGLGWVLTYDKAQEINTAFFVKLFNTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDN----------YDGH-LLIQWYSKGIYKFKYAILEA-VRKVFD-YK-SIYEKV-RFKD----SEYSGGFVEGDAPEFPI-VIEEN----F--------TFYNVDLEDGLMTGIF----------------LDQ-KEVR-KKLRGQYA----KER-HVLNLFSYTGAFSVIAASE-A---S-STTSVDLANRSRSLTEENFGLNA-ID--PKSQ-YIYVMDTFDFYKY-A--A------------RH----------GHSYDTIVIDPPS------------FARNKKRTFSVQKDYD-K---L-INGAL-N--------ILSSE-GTLL----LCT-----NASVYPLKQFKNTI-KKTLEE-S------GVDYELTEVMG--LP-K-------------D------FKTHPHYK-----------------------------------
75 Fugue 52.2522% -34 - C1 -3GDH TGS1_HUMAN B:[25-235] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EI-AAVPELAKYWAQRYRLFSR-----------F----D--------DGIKLDREGWFSVTP-------------------E-KIAE-HIA-GRVS--Q-SCD-VVVDAFCGVGGNTIQFALT-G---M-RVIAIDIDPVKIALARNNAEVYG-IA--DK-I-EFICGDFLLLASF------------------------------LKADVVFLSPPW------------GG---------------------------P--------DYATA-ETFD----IRT-----MMSPD-----GFEI-FRLS---K------KI---TN------NI-V-------------YF-----LPRNADIDQVASLAGPGGQVEIEQNFLNNKLKTITAYFGDLIR
77 Fugue 51.1216% -43 - C1 -1NV9 PRMC_THEMA A:[15-284] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIWSLI-RDCSGKLEGVTETSVLEVL-LIVSRVLGIRKEDLFLKDLGVSPTEEK---RI-LELVE----K--------RASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETE-ELVE-LAL-ELIRK-Y-GIK-TVADIGTGSGAIGVSVAKF-S---DAIVFATDVSSKAVEIARKNAERHG-VS--DR-F-FVRKG---EFLEP-F--K------------EK----------FASIEMILSNPPY------------VKSSA------------L---F-EP-PE-ALFGGEDGLDFYRE-FFGR----YDT-----SGKIV-----LMEI-GEDQ---V------EELKKIV------SD-T-------------VF-----LKDSAGKYRFLLLNRRSS-------------------------
23 PsiBlast_CBE 50.4931% -25 - C1 -1WXX ? C:[210-308] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GE-RALDVFSYAGGFALHLALG-F---R-EVVAVDSSAEALRRAEENARLNG-LG--N--V-RVLEANAFDLLRR-L--E------------KE----------GERFDLVVLDPP------------------------------A---F-AK-GK-K--------DVERA-YRAY----KEV-----N------------------------------------------------------------------------------------------------------------
63 HHSearch 50.3619% -46 - C1 -1JG1 PIMT_PYRFU A:[76-224] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP-HMVA-IML-EIANL-K-PGM-NILEVGTGSGWNAALISEI-VK--T-DVYTIERIPELVEFAKRNLERAG-VK--N--V-HVILGDGSKGFPP-----------------------------KAPYDVIIVTAGA------------PKIPE------------P--------LI-E--------QLKIG-GKLI----IPV-----GSYHL-----WQEL-LEVR---KTKD---GIKIKNH------GG-V-------------AF-----VPLIGE-------------------------------------
24 PsiBlast_CBE 49.3731% -26 - C1 -1WXX ? B:[210-308] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GE-RALDVFSYAGGFALHLALG-F---R-EVVAVDSSAEALRRAEENARLNG-LG--N--V-RVLEANAFDLLRR-L--E------------KE----------GERFDLVVLDPP------------------------------A---F-AK-GK-K--------DVERA-YRAY----KEV-----N------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 48.6631% -28 - C1 -1WXX - ? A:[210-308] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GE-RALDVFSYAGGFALHLALG-F---R-EVVAVDSSAEALRRAEENARLNG-LG--N--V-RVLEANAFDLLRR-L--E------------KE----------GERFDLVVLDPP------------------------------A---F-AK-GK-K--------DVERA-YRAY----KEV-----N------------------------------------------------------------------------------------------------------------
59 HHSearch 48.0117% -29 - C1 -3P9N ? A:[10-170] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG----G--------RRIAVPPRG---TTDR----------------VRE-SLFN-IVT-ARRD--L-TGL-AVLDLYAGSGALGLEALSRGA---A-SVLFVESDQRSAAVIARNIEALG-LS--G--A-TLRRGAVAAVVAA-G----------------T----------TSPVDLVLADPPY------------NVDSA------------DVDAI-LA-AL-GTNG-----WTREG-TVAVVERATTC-----APLTW-----PEGW-RRWP------------------------------------------------------------------------------------------
64 HHSearch 47.9319% -23 - C1 -2IGT ? A:[112-273] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W-PLSLL----G--------VEFLGRFTAFRHVGVF----------------PEQIVHWE-WLK-NAVETAD-RPL-KVLNLFGYTGVASLVAAAA-G---A-EVTHVDASKKAIGWAKENQVLAG-LEQAP--I-RWICEDAMKFIQR-E--E------------RR----------GSTYDIILTDPPK------------FGRGTHGEVWQLFDHLPL---M-LD-ICRE--------ILSPK-ALGL----VLT-----A------------------------------------------------------------------------------------------------------------
66 HHSearch 47.6815% -39 - C1 -1WY7 ? A:[23-195] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VWLEQYRTPGN----------------AAS-ELLW-LAY-SL-GD-I-EGK-VVADLGAGTGVLSYGALLL-GA--K-EVICVEVDKEAVDVLIENLGEFK--G--K--F-KVFIGDVSEF--------------------------------NSRVDIVIMNPPF------------GSQRK------------H---ADRP-FLLK--------AFEIS-DVVY----SIH-----LAKPE-----VRRF-IEKFSWEH------GFVVTHRLTTKIEIP------------------------HRKKLERITV-------------------------------