@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2018: (2016-03-31 )
MATIHFTKVHGSQNDFFLVDEEGNQIMDWSDAKRADFAIKLCDREHSLGGADGILYVTKSSEAGPIGQMRVVNSDGSIASMCGNGLRTVARYLLEKHALTEAKVETMKAILDVKKATSLGFDIPTYQVEISPVKFNAESLPMNVGVEKLFNQVVPELDAELAFSAVSVPNPHLITFVDQTVLDSDRQETLASYLNSENPYFPDGVNVSFVKRLSDDAIYVRTFERGVGFTNACGTAMSACSLIKKMLDKDTFETPLNVYNDGGRVQVTAKKDEAGDISLQLIGNATFVSTGSVSYESDTVTELTNEATPEQAQYQELVKEVKEFLKTTE

Atome Classification :

(21 SA) .........10........20........30..-......40........50........60.--------------.......-------70.-------.......80........90........---100.---.---.-....--110.......120.....------..130.......140-.....---..150...--..---..160.......170.......-----180.---......--.190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MATIHFTKVHGSQNDFFLVDEEGNQIMDWSDAK-RADFAIKLCDREHSLGGADGILYVTKSSE--------------AGPIGQM-------RVV-------NSDGSIASMCGNGLRTVARYLLEKHAL---TEAK---V---E-TMKA--ILDVKKATSLGFDIPTYQ------VEISPVKFNAESLPM-NVGVE---KLFNQVVP--EL---DAELAFSAVSVPNPHLITFVDQ-----TV-L---DSDRQE--TLASYLNSENPYFPDGVNVSFVKRLSDDAIYVRTFERGVGFTNACGTAMSACSLIKKMLDKDTFETPLNVYNDGGRVQVTAKKDEAGDISLQLIGNATFVSTGSVSYESDTVTELTNEATPEQAQYQELVKEVKEFLKTTE
28 PsiBlast_CBE 92.2631% -75 - C1 -3EJX DAPF_ARATH D:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
1 PsiBlast_PDB 91.8631% -75 - C1 -3EJX DAPF_ARATH A:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
3 PsiBlast_PDB 91.7129% -97 - C1 -2OTN - DAPF_BACAN A:[1-285] MSQFSFTKMHGLGNSYIYVNMFEEQI---PEED-LALVAEKVSNINTGIG-ADGMILICPSDV--------------A-PV-KM-------RMF-------NNDGSEGKSCGNGLRCVAKYAYE-HKL---VEDT---VFTIE-TLAG--IVTAEVTVEEG-KVTLAK------IDMGAPRLTRAEIPMLGEGET---PFIRENFL--YN---NHRYAFTAVSMGNPHAVIFVDD--------V---EQAPLT--TLGPVLET-HEMFPERVNVEFIEILNEEEMNFRVWERGSGVTQACGTGACAAVVASILNGKMERGKEITVHLAGGDLMIAWT--EEGNVLMK--GPAEVICRGVYEYK---------------------------------
2 PsiBlast_PDB 91.4531% -74 - C1 -3EKM DAPF_ARATH A:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
26 PsiBlast_CBE 91.1731% -76 - C1 -3EJX DAPF_ARATH F:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
30 PsiBlast_CBE 91.1531% -75 - C1 -3EJX DAPF_ARATH B:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
27 PsiBlast_CBE 91.1431% -75 - C1 -3EJX DAPF_ARATH E:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
21 PsiBlast_CBE 90.7331% -75 - C1 -3EKM DAPF_ARATH F:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
23 PsiBlast_CBE 90.4431% -76 - C1 -3EKM DAPF_ARATH D:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
29 PsiBlast_CBE 90.4031% -76 - C1 -3EJX DAPF_ARATH C:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
22 PsiBlast_CBE 90.3831% -73 - C1 -3EKM DAPF_ARATH E:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
25 PsiBlast_CBE 90.1231% -75 - C1 -3EKM DAPF_ARATH B:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
24 PsiBlast_CBE 90.0931% -74 - C1 -3EKM DAPF_ARATH C:[25-308] -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN---------------GTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFI-----------AE---L---E-NLQG--KHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPT-KLSGN---KGEAVVEA--ELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV-D---DLNLPE--IGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS-------------------------------------
31 HHSearch 87.7829% -79 - C1 -3EJX DAPF_ARATH A:[25-311] -GVLHFVKYHGLGNDFILVDNRDSSEPKITQ-----EQAAKLCDRN-FGVGADGVIFAMPGV---------------NGTDYAM-------RIF-------NSDGSEPEMCGNGVRCFARFIAELENLQGKHSFT---I---H-TGAG--LIVPEIQDD-----GQVK------VDMGTPILKAQDVPT-KLSGNKGEAVVEA-EL--VVD--GVSWNVTCVSMGNPHCITFGKK-----GGPNLKVDDLNLP--EIGPKFE-HHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVAAVLEGRA--DRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGSALL----------------------------------
34 HHSearch 86.6728% -88 * C1 *2OTN - DAPF_BACAN A:[2-285] -SQFSFTKMHGLGNSYIYVNMFEE---QIPEED-LALVAEKVSNIN-TGIGADGMILICPSD----------------VAPVKM-------RMF-------NNDGSEGKSCGNGLRCVAKYAYEHKLVED-TVFT---I---E-TLAG--IVTAEVTVEE-GKVTLAK------IDMGAPRLTRAEIPM-L-GEG---ETPFIRENFLYN---NHRYAFTAVSMGNPHAVIFVDD-----VE-Q-----APLT--TLGPVLE-THEMFPERVNVEFIEILNEEEMNFRVWERGSGVTQACGTGACAAVVASILNGKMERGKEITVHLAGGDLMIAWTEE----GNVLMKGPAEVICRGVYEYK---------------------------------
11 PsiBlast_PDB 85.5927% -84 - C1 -2Q9H DAPF_HAEIN A:[1-273] ---MQFSKMHGLGNDFVVVDGVTQNVFFTPETI-R-----RLANR-HCGIGFDQLLIVEAPYD--------------PELDFHY-------RIF-------NADGSEVSQSGNGARCFARFVTLK-GL---TNKKDISV---S-TQKGNMVLTVKDDNQIRVNMGEPI------WEPAKIPFTANKFEK-NYILR---TDIQTVL-------------CGAVSMGNPHCVVQVDD--------I---QTANVE--QLGPLLESHE-RFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSG--ACAAVAVGIMQGLLNNNVQVDLPGGSLMI--EWNGVGH-PLYMTGEATHIYDGFIT-----------------------------------
10 PsiBlast_PDB 85.2928% -85 - C1 -2GKJ DAPF_HAEIN A:[1-273] ---MQFSKMHGLGNDFVVVDGVTQNVFFTPETI-R-----RLANR-HCGIGFDQLLIVEAPYD--------------PELDFHY-------RIF-------NADGSEVSQCGNGARCFARFVTLK-GL---TNKKDISV---S-TQKGNMVLTVKDDNQIRVNMGEPI------WEPAKIPFTANKFEK-NYILR---TDIQTVL-------------CGAVSMGNPHCVVQVDD--------I---QTANVE--QLGPLLESHE-RFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSG--ACAAVAVGIMQGLLNNNVQVDLPGGSLMI--EWNGVGH-PLYMTGEATHIYDGFIT-----------------------------------
32 HHSearch 84.9730% -75 - C1 -3FVE DAPF_MYCTU A:[2-288] ---MIFAKGHGTQNDFVLLPDVDAE-LVLTA-----ARVAALCDRR-KGLGADGVLRVTTAGAAQAVGVLDSLPEGVRVTDWYM-------DYR-------NADGSAAQMCGNGVRVFAHYLRASGLEVR-DEFV---V---G-SLAG--PRPVTCHHVEA-AYADVS------VDMGKANRLGAG-E------------AV--------------FHGLAVDVGNPHLACVDSQ-----LT-V---D--GLAALDVG--VSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAALAAVGSP-TGTLTVHVPGGEVVVTVTD-----ATSFLRGPSVLVARGDLADDWWNA-----------------------------
9 PsiBlast_PDB 84.9428% -85 - C1 -2GKE DAPF_HAEIN A:[1-273] ---MQFSKMHGLGNDFVVVDGVTQNVFFTPETI-R-----RLANR-HCGIGFDQLLIVEAPYD--------------PELDFHY-------RIF-------NADGSEVSQCGNGARCFARFVTLK-GL---TNKKDISV---S-TQKGNMVLTVKDDNQIRVNMGEPI------WEPAKIPFTANKFEK-NYILR---TDIQTVL-------------CGAVSMGNPHCVVQVDD--------I---QTANVE--QLGPLLESHE-RFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSG--ACAAVAVGIMQGLLNNNVQVDLPGGSLMI--EWNGVGH-PLYMTGEATHIYDGFIT-----------------------------------
8 PsiBlast_PDB 84.5928% -83 - C1 -1GQZ - DAPF_HAEIN A:[1-273] ---MQFSKMHGLGNDFVVVDGVTQNVFFTPETI-R-----RLANR-HCGIGFDQLLIVEAPYD--------------PELDFHY-------RIF-------NADGSEVSQCGNGARCFARFVTLK-GL---TNKKDISV---S-TQKGNMVLTVKDDNQIRVNMGEPI------WEPAKIPFTANKFEK-NYILR---TDIQTVL-------------CGAVSMGNPHCVVQVDD--------I---QTANVE--QLGPLLESHE-RFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSG--ACAAVAVGIMQGLLNNNVQVDLPGGSLMI--EWNGVGH-PLYMTGEATHIYDGFIT-----------------------------------
4 PsiBlast_PDB 66.7930% -65 - C1 -3FVE DAPF_MYCTU A:[4-261] -----FAKGHGTQNDFVLLPDVDAELV-----L-TAARVAALCDRRKGLG-ADGVLRVTTAGA--------------AQAVGVLDSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYL--RASG---LEVR---D---EFVVGS--LAGPRPVTCHHVEAAYAD------VSVDMGKANRLGAGE-AV--------FHGL----------------AVDVGNPHLACVDSQ-----LT-V---DGLAAL--DVG--VSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAALAAVGSPTGT-LTVHVPGGEVVVT-------------------------------------------------------------